Pairwise Alignments

Query, 308 a.a., Transcriptional regulator, LysR family from Pseudomonas putida KT2440

Subject, 324 a.a., LysR family transcriptional regulator from Pseudomonas simiae WCS417

 Score =  123 bits (308), Expect = 7e-33
 Identities = 88/310 (28%), Positives = 145/310 (46%), Gaps = 11/310 (3%)

Query: 1   MRFTLRQMQVFVAVAQHQSVSRAASLLALSQSAASTSITELERQSSCQLFDRAGKRLALN 60
           MR TLRQ+Q+F  V   +S SRAA  ++L+Q A S  I +LE      LFD  GK+L + 
Sbjct: 6   MRMTLRQLQIFNEVCDLRSYSRAAEEMSLTQPAVSLQIRQLEELIGQPLFDYVGKKLYMT 65

Query: 61  ALGHQLLPQAVALLDQAKEIEDLLNGKSGF--GSLAVGATLTIGNYLATLLIGNYMQTHP 118
                L   +  +  + + ++  L+   G   G L + A  +   Y    L   + + HP
Sbjct: 66  EAAEALQRASRDIFGRLENLDMQLSDMQGSLQGQLKL-AIESSAKYFVPHLFAAFKRQHP 124

Query: 119 ESQVKLHVQNTAHIVQQVAHYEIDLGLIEGDCNHPDLEVQPWVEDELVVFCAPQHPLAKL 178
           E Q+ L V N A ++++++    DL ++        LE  P++ + +V      HPL+  
Sbjct: 125 EVQLHLTVVNRAQVIRRLSDNRDDLVIMSMVPQDMGLEFLPFLNNPIVAVAPHDHPLSLQ 184

Query: 179 GRADIESLSQEAWILREQGSGTRLTFDQAMRHHRANLNIRLELEHTEAIKRAVESGLGIG 238
           G   ++ L     +LRE GSGTRL  ++  +  R +    +E+   EA +  V +GLG+ 
Sbjct: 185 GPLRLQDLEPYTLLLREPGSGTRLACEEYFKEKRVHFTQTVEVASAEAQRECVCAGLGVA 244

Query: 239 CISRLALRDAFRRGSLVPVETPELDLLRQFYFIWHKQKYQTSAMREFLELCRNFTAGFTR 298
            ++R A+      G L  +   EL L R +  +  K K  +     FL        GF R
Sbjct: 245 LLTRHAVNMELATGGLKELPVEELPLYRSWCLVQAKAKRLSPVAHAFL--------GFIR 296

Query: 299 SDEIVLPPIA 308
           S+ + +  +A
Sbjct: 297 SERVQISALA 306