Pairwise Alignments

Query, 216 a.a., DNA-binding response regulator from Pseudomonas putida KT2440

Subject, 221 a.a., Transcriptional regulatory protein DegU from Pseudomonas sp. RS175

 Score =  158 bits (400), Expect = 7e-44
 Identities = 92/211 (43%), Positives = 129/211 (61%), Gaps = 13/211 (6%)

Query: 4   YEILIADDHPLFRGALRQAVTLGLGSDVRLVEVASIAELETRLS---EKADWDLVLLDLN 60
           Y+ILIADDHPLFR A+   ++ G        EV   A+L++ L+   E  D DL+LLDLN
Sbjct: 2   YKILIADDHPLFREAIHNVISDGFPGS----EVMETADLDSALALTHEHDDLDLILLDLN 57

Query: 61  MPGAYGFSGLVLLRGQYPQIPVVMVSAQEEAAVVVKSREFGASGFIPKSSTLEVIQDAVR 120
           MPG +G +GL+ LR + P IPVV+VSA+++  +V+++  +GA GFI KSS    + DA+ 
Sbjct: 58  MPGMHGLNGLINLRNEAPTIPVVIVSAEQDKQIVLQAITYGAVGFITKSSPRSQMTDAIE 117

Query: 121 KVLDGEVWWPPQAFEKVD------VSAEAKAASEGLASLTPQQFRVLTMVCEGLLNKQIA 174
           ++L+G V+ PP             +S       E L +LT +Q  VL  + +G  NKQIA
Sbjct: 118 QILNGNVYLPPDIIRTQKNPVGRRLSETPAFPPELLQALTRKQLLVLERMTKGESNKQIA 177

Query: 175 YELSVSEATIKAHVTAIFRKLGVRTRTQAAL 205
           Y L ++E T+KAHV+AI RKL V  R QA L
Sbjct: 178 YTLDIAETTVKAHVSAILRKLNVHNRVQAIL 208