Pairwise Alignments

Query, 216 a.a., DNA-binding response regulator from Pseudomonas putida KT2440

Subject, 222 a.a., Transcriptional regulatory protein DegU from Azospirillum sp. SherDot2

 Score = 90.9 bits (224), Expect = 2e-23
 Identities = 64/215 (29%), Positives = 104/215 (48%), Gaps = 11/215 (5%)

Query: 5   EILIADDHPLFRGALRQAVTLGLGSDVRLVEVASIAELETRLSEKAD-----WDLVLLDL 59
           ++LIADDH + R  L   V   L     +V   S ++L   L          +DL+++DL
Sbjct: 2   QVLIADDHSIVRSGLTHLVG-ELDEQATVVAATSFSQLNAILDGAMQDGGTAFDLIVMDL 60

Query: 60  NMPGAYGFSGLVLLRGQYPQIPVVMVSAQEEAAVVVKSREFGASGFIPKSSTLEVIQDAV 119
            MPG  G   +  L  +   +PV + S  E    +      G   FIPKS+   ++ + +
Sbjct: 61  RMPGLGGLEDVEALVKRVAPVPVAIFSMIESPDEMRAVLSRGVRAFIPKSTDDVLVVNIL 120

Query: 120 RKVLDGEVWWPPQAFEKVDVSAEAKAASEGLA-----SLTPQQFRVLTMVCEGLLNKQIA 174
           R V+ G  + PP        +  A      +A      LT +Q  VL ++ +GL N++I 
Sbjct: 121 RLVMAGGSYVPPVLGMPGAPAHAAAGTPRAVAPSIFDGLTRRQLEVLDLLAQGLSNQEIG 180

Query: 175 YELSVSEATIKAHVTAIFRKLGVRTRTQAALLLQQ 209
             L ++ +T+K HVT + + LGV +RTQA LL+++
Sbjct: 181 ERLGLNLSTVKTHVTGVLKALGVGSRTQAVLLVKE 215