Pairwise Alignments

Query, 355 a.a., Protein RecA from Pseudomonas putida KT2440

Subject, 352 a.a., recombinase RecA from Pseudomonas simiae WCS417

 Score =  605 bits (1560), Expect = e-178
 Identities = 311/352 (88%), Positives = 329/352 (93%), Gaps = 3/352 (0%)

Query: 1   MDDNKKRALAAALGQIERQFGKGAVMRMGDHERQGIPAISTGSLGLDIALGIGGLPKGRI 60
           MDDNKK+ALAAALGQIERQFGKGAVMRMGDH+RQ IPAISTGSLGLDIALGIGGLPKGRI
Sbjct: 1   MDDNKKKALAAALGQIERQFGKGAVMRMGDHDRQAIPAISTGSLGLDIALGIGGLPKGRI 60

Query: 61  VEIYGPESSGKTTLTLSVIAEAQKNGATCAFVDAEHALDPEYAGKLGVNVDDLLVSQPDT 120
           VEIYGPESSGKTTLTLSVIA+AQK GATCAFVDAEHALDPEYAGKLGVNVDDLLVSQPDT
Sbjct: 61  VEIYGPESSGKTTLTLSVIAQAQKMGATCAFVDAEHALDPEYAGKLGVNVDDLLVSQPDT 120

Query: 121 GEQALEITDMLVRSNAVDVIIVDSVAALVPKAEIEGEMGDMHVGLQARLMSQALRKITGN 180
           GEQALEITDMLVRSNA+DVI+VDSVAALVPKAEIEGEMGDMHVGLQARLMSQALRKITGN
Sbjct: 121 GEQALEITDMLVRSNAIDVIVVDSVAALVPKAEIEGEMGDMHVGLQARLMSQALRKITGN 180

Query: 181 IKNANCLVIFINQIRMKIGVMFGSPETTTGGNALKFYASVRLDIRRTGAVKEGDEVVGSE 240
           IKNANCLVIFINQIRMKIGVMFGSPETTTGGNALKFYASVRLDIRRTGAVKEGDEVVGSE
Sbjct: 181 IKNANCLVIFINQIRMKIGVMFGSPETTTGGNALKFYASVRLDIRRTGAVKEGDEVVGSE 240

Query: 241 TRVKIVKNKVSPPFRQAEFQILYGKGIYRNGEIIDLGVSQGLVEKSGAWYAYQGNKIGQG 300
           TRVK+VKNKV+PPFRQAEFQILYGKGIY NGE+IDLGV  G VEKSGAWYAY G+KIGQG
Sbjct: 241 TRVKVVKNKVAPPFRQAEFQILYGKGIYLNGEMIDLGVLHGFVEKSGAWYAYNGSKIGQG 300

Query: 301 KANAAKYLAENPAIGAEIEKQIREKLLKAGAAAEAGKAAAAEADADDMADAD 352
           KAN+AK+LA+NP I A +EKQIR+KLL    AA   KAAA     +++ +AD
Sbjct: 301 KANSAKFLADNPDIAATLEKQIRDKLL---TAAPDVKAAANREPVEEVEEAD 349