Pairwise Alignments

Query, 262 a.a., metallopeptidase, M23B subfamily from Pseudomonas putida KT2440

Subject, 303 a.a., Murein hydrolase activator NlpD from Variovorax sp. SCN45

 Score =  211 bits (537), Expect = 1e-59
 Identities = 127/290 (43%), Positives = 163/290 (56%), Gaps = 37/290 (12%)

Query: 4   LLVGCSSTSSNSARVVDRN--------NTVPKRPAVTS----------------GQYIVK 39
           ++ GCS T    A V DR         +TVP  P +T+                G Y V+
Sbjct: 20  VIAGCS-TPRGPAPVEDRGTMTRAPAPSTVPGGPPITTDANGKPLAGIENYGKPGYYAVR 78

Query: 40  PGDTLFSIAFRYGWDYKELAARNGIQAPYTIRPGQAIRF--SSGSSSRTTVVSSPSSSSR 97
           PGDT+  I    G  ++++   N I  P  I  GQ +R    +GS +   V   PSS S 
Sbjct: 79  PGDTIRRIGIETGQRWQDIVRWNNIDNPDLIEVGQVLRVIPPTGSGTSVAVAPPPSSGSE 138

Query: 98  TTVTRRPVGSTATAPASTSKPATSAPSAPAPVVATVPAAERAVGG-----WTWPANGVLI 152
             VT+        AP +   P+T A   PAPV A+  +      G     W WPA+G LI
Sbjct: 139 GAVTKPVTPPPVIAPVT---PSTGATKPPAPVTASPASPGSGASGDEDLGWIWPASGSLI 195

Query: 153 GKFASNGSLNKGIDIAGDLGQPVFAASDGAVVYAGSGLRGYGELIIIKHSDTYVSAYGHN 212
             F  + + NKG DI+G  G PV AA+DG VVYAG+GLRGYG LII+KH++TY++AY HN
Sbjct: 196 AGF--DEAKNKGYDISGKAGDPVLAAADGRVVYAGAGLRGYGNLIILKHNNTYLTAYAHN 253

Query: 213 RRLLVREGQQVKAGQSIAEMGSTGTDRVKLHFEIRRQGKPVDPLQFLPRR 262
           + LLV+E Q V+ GQ IAEMGS+  DRVKLHFEIRRQGKPVDP ++LP R
Sbjct: 254 QTLLVKEDQSVQKGQKIAEMGSSDADRVKLHFEIRRQGKPVDPSRYLPSR 303