Pairwise Alignments

Query, 262 a.a., metallopeptidase, M23B subfamily from Pseudomonas putida KT2440

Subject, 289 a.a., Murein hydrolase activator NlpD from Pseudomonas sp. DMC3

 Score =  386 bits (992), Expect = e-112
 Identities = 198/270 (73%), Positives = 218/270 (80%), Gaps = 12/270 (4%)

Query: 1   MGSLLVGCSSTSSNSARVVDRNNTVPKRPAVTSGQYIVKPGDTLFSIAFRYGWDYKELAA 60
           + +LLVGCSST S++ RVVDRNN+V +RP VT+GQY+V+PGDTLFSIAFRYGWDYK LAA
Sbjct: 24  LSTLLVGCSSTKSSNVRVVDRNNSVAQRPTVTTGQYVVRPGDTLFSIAFRYGWDYKTLAA 83

Query: 61  RNGIQAPYTIRPGQAIRFSSGSSSRTTVV-----SSPSSSSRTTVTRRPVGSTATAPAST 115
           RN I  PYTI PGQ IRF   S S  T V     SSPSSSS+TTV RR    T T   + 
Sbjct: 84  RNNIPTPYTIHPGQTIRFDGRSGSTPTAVVSNSSSSPSSSSKTTVIRRQANGTTTTTTTG 143

Query: 116 SK---PATSAPSAPAPVVATVPAAERAVGGWTWPANGVLIGKFASNGSLNKGIDIAGDLG 172
           SK   P+ ++  APAP+    P A  A  GW WP+NGVLIGKF+SNGSLNKGIDIAGDLG
Sbjct: 144 SKGVVPSVASKPAPAPL----PPAGPAPTGWGWPSNGVLIGKFSSNGSLNKGIDIAGDLG 199

Query: 173 QPVFAASDGAVVYAGSGLRGYGELIIIKHSDTYVSAYGHNRRLLVREGQQVKAGQSIAEM 232
           QPV AASDG VVYAGSGLRGYGEL+IIKHS+TYVSAYGHNRRLLVREGQQVK GQ+IAEM
Sbjct: 200 QPVLAASDGTVVYAGSGLRGYGELVIIKHSETYVSAYGHNRRLLVREGQQVKVGQTIAEM 259

Query: 233 GSTGTDRVKLHFEIRRQGKPVDPLQFLPRR 262
           GSTGTDRVKLHFEIRRQGKPVDPLQFLPRR
Sbjct: 260 GSTGTDRVKLHFEIRRQGKPVDPLQFLPRR 289