Pairwise Alignments

Query, 298 a.a., Transcriptional regulator, LysR family from Pseudomonas putida KT2440

Subject, 306 a.a., HTH-type transcriptional regulator PgrR from Azospirillum sp. SherDot2

 Score =  216 bits (551), Expect = 4e-61
 Identities = 120/291 (41%), Positives = 183/291 (62%), Gaps = 6/291 (2%)

Query: 4   RWEGIDEFVAVAESGQFTAAAERLGVSSSHISRQIARLEDRLQTRLLYRSTRRVTLSEAG 63
           R + +   V V +SG  +AAAERLG+S+S ISR+IA++E+RL TRLL R+TRR+ L++AG
Sbjct: 3   RLDDLTVLVEVVDSGSLSAAAERLGLSASAISRRIAQMENRLGTRLLARTTRRIALTDAG 62

Query: 64  QTFLQHCQRLQDGREEALRAMGDLASEPKGLLRMTCAVAYGERFIVPLVTRFMALYPQLR 123
            TF    + +    +EA +++ ++  EP+G LR+T  V +G+  + PL+  ++  YP + 
Sbjct: 63  ATFCLRARAILAALDEAEQSLTEMGEEPRGTLRITMPVLFGQMRVAPLLASYLRRYPGVS 122

Query: 124 VDVELSNHTLDLLHEGMDLAIRLGRLADSRLVATRLAPRRMYLCVSPAYLERYGRPHSLS 183
           ++V L++    L+ EG DLAIR GRLADS L+A RL P R ++  SP YLER G P S +
Sbjct: 123 LEVSLNDRVQRLVEEGFDLAIRAGRLADSSLIARRLRPLRRHVVASPDYLERRGVPQSPA 182

Query: 184 ELARHNCLV-----GSSDLWALQQDGREISQRVQGNWRCNSGQAVLDAALQGIGLCQLPD 238
           +L RH CL      G ++   +  D REI  R  G+++ +S   +  AA+ G+GL +L D
Sbjct: 183 DLVRHECLTLLSGSGRTEWEFMAGDRREI-LRPSGSFQADSLWLLRHAAVGGLGLARLAD 241

Query: 239 YYVLEHLNSGALVSLLEAHQPPNTAVWALYPQQRHLSPKVRRLVDYLKEGL 289
           + V E + +G LV LL   +  + A+  +YP  RH+SPKVR  +++L  GL
Sbjct: 242 FIVEEDIRAGRLVPLLSELEVTDEAIHVVYPATRHVSPKVRSFIEHLLTGL 292