Pairwise Alignments

Query, 1174 a.a., DNA polymerase III, alpha subunit from Pseudomonas putida KT2440

Subject, 1207 a.a., DNA polymerase III subunit alpha from Pontibacter actiniarum KMM 6156, DSM 19842

 Score =  738 bits (1904), Expect = 0.0
 Identities = 437/1168 (37%), Positives = 660/1168 (56%), Gaps = 101/1168 (8%)

Query: 5    FVHLRVHSEFSLVDGLVRIKPLAKALTGMNMPAVAITDQSNMCSLVKFYKTAMGAGIKPI 64
            F HL  H+++SL+DG   I  L K      MPAVA+TD  NM +   F   A    +KPI
Sbjct: 4    FSHLHTHTQYSLLDGQASISALMKKAQADGMPAVAMTDHGNMFAAFNFVAEANKYNVKPI 63

Query: 65   CGADLWLAGADPEAPLSRIC--------FLAMDPKGYRNLTELISRGWTDGQRNGLVILQ 116
             G + +L         S+           LA D +GY+NL +L S  + +G  +    + 
Sbjct: 64   VGCEFYLVKDRHLKTFSKEVKDVRHHQLLLAKDQEGYQNLAKLCSLSYIEGVYSKWPRID 123

Query: 117  REWIAPASEGLIALSAGKEGDIGMALLAGRQDEAEALLQDWMGMFPERFYVEVQR----- 171
            +E +   S+GLIA S     ++  A+L   ++EAE + + W+ +F E +Y+E+QR     
Sbjct: 124  KELLLKYSKGLIATSCCIGAEVPQAILWKSEEEAEEIFKWWLDVFGEDYYIEIQRHGLQN 183

Query: 172  ---TNRARDEEYVHAAVALADKLGAPLVATNDVRFIKQADFDAHETRVC----------I 218
               T +++ E+     +  A K    ++ TND  ++ Q D++AH+  +C          +
Sbjct: 184  IDGTGKSQ-EDINQVLLKWAKKYNVKVICTNDSHYVDQEDWNAHDILLCVNTGEDQSTPV 242

Query: 219  GEGWT-----LDDPRR------------------------------PRCY----SDQQYL 239
            G+  T     L D ++                              P+      +DQ Y 
Sbjct: 243  GDFQTKYYRFLSDDQKVIYDTVENVRSKYSNHSTVRQMLNRIDEAGPKTRFGFPNDQFYF 302

Query: 240  KSAEEMAELFSDLPDAIANTVEIAKRCNIQVQLGKYFLPDFPTP-NGMGIDDYLRHVAHE 298
            K+  EM ELF D+P+A+ NT EI  +           LP+FP P    G D +LRH+ +E
Sbjct: 303  KTQAEMNELFKDVPEAVDNTNEIVDKITPPKLKRDILLPNFPIPPEHAGPDAFLRHLTYE 362

Query: 299  GLEERLAVLWPKETTPNYEEKRQVYLDRLKFELDIIIQMGFPGYFLIVMDFIKWAKNNDV 358
            G ++R       + TP+ EE       RL +EL II  MGF GYFLIV DFI   ++  V
Sbjct: 363  GAKKRYT-----DITPDVEE-------RLDYELRIIETMGFAGYFLIVQDFINRGRDMGV 410

Query: 359  PVGPGRGSGAGSLVAYVLKITDLDPLAYDLLFERFLNPERVSMPDFDVDFCMDGRDRVID 418
             VGPGRGS AGS VAY + IT++DP+ Y+LLFERFLNPERVSMPD D+DF    R RVID
Sbjct: 411  FVGPGRGSAAGSAVAYCIGITNIDPIKYNLLFERFLNPERVSMPDIDIDFDDVNRQRVID 470

Query: 419  YVAEAYGRNAVSQIITFGTMAAKAVVRDVARVQGKSYGLADRLSKMIPFEVGMTLEKAYE 478
            YV + YG+  V+QIITFGTMAAK+ ++DVAR        A+ L+KM+P   G TL KA+ 
Sbjct: 471  YVVDKYGKTQVAQIITFGTMAAKSSIKDVARSTSLPLAEANELAKMVPDTPGTTLAKAFM 530

Query: 479  QEEILRDFLKGDEDAREIWDMALKLEGVTRGTGKHAGGVVIAPTKLTDFSPIACDEEGGG 538
            +   L    +G +    +  +A KLEG  R TG HA GV+IAP  +T++ P++  ++   
Sbjct: 531  ENLDLAAIREGTDHRAAVLKLAEKLEGSVRNTGIHAAGVIIAPDDITNYIPVSTSKDADL 590

Query: 539  LVTQFDKDDVEAAGLVKFDFLGLRTLTIIKWAMEIINREQAKKNLPDLNIDFIPLDDRKT 598
            LVTQFD   +E+AG++K DFLGL+TLTIIK A+E+I     K +  +++ID IP+DD KT
Sbjct: 591  LVTQFDGKVIESAGMLKMDFLGLKTLTIIKDALELIK----KNHGVEIDIDEIPIDDEKT 646

Query: 599  YELLQKAETTAVFQLESRGMKELIKKLKPDCLEDLIALVALFRPGPLQSGMVDDFINRKH 658
            Y+L Q+ +T   FQ ES GM+  +K L+P  +EDLIA+ AL+RPGP+Q   + +FINRKH
Sbjct: 647  YQLYQRGDTIGTFQFESEGMRMYLKDLQPTNIEDLIAMNALYRPGPMQ--FIPNFINRKH 704

Query: 659  GRAELAYPHSDYQYEGLKPVLAPTYGIILYQEQVMQIAQVMAGYTLGGADMLRRAMGKKK 718
            GR ++ YPH     E L+P+L  +YGI++YQEQ+MQ AQ++AGY+LGGAD+LRRAMGKK 
Sbjct: 705  GREDVEYPH-----ELLEPILNYSYGIMVYQEQIMQTAQILAGYSLGGADLLRRAMGKKD 759

Query: 719  PEEMAKQRGGFIEGCV-ANNIDADLAGNIFDLVEKFAGYGFNKSHSAAYGLVSYQTAWLK 777
             ++MA++R  FI G    + I +  A  +FD++EKFA YGFN+SHSAAY +V+YQT +LK
Sbjct: 760  MKKMAEEREKFIAGAAEIHKIPSKKASEVFDVMEKFAQYGFNRSHSAAYSVVAYQTGYLK 819

Query: 778  THYPAPFMAAVLSADMHNTDKVVVLVEEVRSMKLRLDAPDVNFSDFKFTVNNDGRIVYGL 837
             HYPA +MAAVL+ +M++  KV   +EE R   + +  PDVN S  KF VN  G+I +GL
Sbjct: 820  AHYPAEYMAAVLTNNMNDIKKVTFFIEEARKQGVAVLGPDVNESLLKFNVNEQGQIRFGL 879

Query: 838  GAIKGVGEGPVEAIVEARAQGGPFKDLFDFCERIDLKRVNKRTLDALVRSGALDRLGPHF 897
             AIKG GE  V+AI+  R   G ++D+FDF +R++L+ VNK+T +++  +G  D    + 
Sbjct: 880  AAIKGTGESAVDAIISEREANGMYQDIFDFSKRVNLRAVNKKTFESMALAGCFDSWELYH 939

Query: 898  HDEIKAYHANIDINRATLLSALGEAIKAAEQAAHTADSGHVDLFGSMFDAADVDVYANHR 957
              ++      +++     +S L +A++          +    LFG    AA         
Sbjct: 940  RAQL------MEVPEGESMSLLEKAVRYGNNYQAEQQAAQQSLFGG--SAAVAAPMPKIP 991

Query: 958  KVRELTLKERLKGEKDTLGLYLTGHPIDEYETEIRRFARQRIVDLKPSRETQ-TIAGMII 1016
            +V+  T  E L+ EK+ +G Y++GHP+D+++ EI  +    + +++  +     +AGM+ 
Sbjct: 992  EVQPWTQAEMLRREKEVVGFYMSGHPLDQFKLEIDSYCTCALSNIEEYKNRDVNVAGMVT 1051

Query: 1017 ALRVMKNKKGDKMGFVTLDDRSGRIEASLFADAFMAAQSLLQTDAMVVVEGEVS-NDDFS 1075
             + +   K G+     T++D    ++ +LF + ++     L+    + + G+V       
Sbjct: 1052 DVVIRTAKNGNPFALFTIEDYDTTMQMALFGEDYVKFSPYLKIGLYLFIRGKVQLRYKTE 1111

Query: 1076 GGLRLRVKQVMTMEDARTKLAESLRLKV 1103
                L+ + +  + D   K+A+ ++L +
Sbjct: 1112 DQWELKPQNIQLLGDVMDKMAQGVQLNI 1139