Pairwise Alignments

Query, 1174 a.a., DNA polymerase III, alpha subunit from Pseudomonas putida KT2440

Subject, 1154 a.a., DNA polymerase III subunit alpha from Brevundimonas sp. GW460-12-10-14-LB2

 Score =  760 bits (1963), Expect = 0.0
 Identities = 462/1133 (40%), Positives = 641/1133 (56%), Gaps = 79/1133 (6%)

Query: 5    FVHLRVHSEFSLVDGLVRIKPLAKALTGMNMPAVAITDQSNMCSLVKFYKTAMGAGIKPI 64
            FVHLRV S +SL++G ++   + K      MPAV + D++N+   ++F +TA  AG++PI
Sbjct: 10   FVHLRVRSAYSLLEGAIKAAKVGKLAADSGMPAVGVADRANLFGALEFSQTAKDAGVQPI 69

Query: 65   CGADLWLAGADPE-----APLSRICFLAMDPKGYRNLTELISRGWTDGQRNGLVILQREW 119
                L + G   +     A +  +  LA D  G+ NL  L S  + D        +  E 
Sbjct: 70   VACALPVFGIGGQINARWAKVPTVVLLAQDTAGWLNLCALSSSAYLDAGEMAEPGVAWEQ 129

Query: 120  IAPASEGLIALSAGKEGDIGMALLAGRQDEAEALLQDWMGMFPERFYVEVQRTNRARDEE 179
            +   SEGLI LS G +G +      G++ E  A L      F +RFYVE+QR     ++ 
Sbjct: 130  VVARSEGLILLSGGPDGPVDPLFAQGKKAEGAAALAAMRAAFGDRFYVELQRHGLEDEKR 189

Query: 180  YVHAAVALADKLGAPLVATNDVRFIKQADFDAHETRVCIGEGWTLDDPRRPRCYSDQQYL 239
                 V  A     PLVATNDV + K     +H+  +CI +G       R R  + + + 
Sbjct: 190  AEPGLVEWAYANDVPLVATNDVYYAKAGQAKSHDALLCIADGAFTGQEDRRRI-TGEHWF 248

Query: 240  KSAEEMAELFSDLPDAIANTVEIAKRCNIQVQLGKYFLPDFPTPNGMGIDDYLRHVAHEG 299
            K A  M E F+DLP+A  NT++IA+RC   V      LP F T  G    D L H A EG
Sbjct: 249  KPAAVMREQFADLPEACDNTIDIARRCAFLVNTHAPILPRFDTGAGRSEADELAHQAREG 308

Query: 300  LEERLAVLWPKETTPNYEEKRQVYLDRLKFELDIIIQMGFPGYFLIVMDFIKWAKNNDVP 359
            L+ RL      E TP   E+   Y  RL++E+ II QMGFPGYFLIV DFIKWAK + +P
Sbjct: 309  LKVRLT-----EVTPAVPEEE--YWTRLEWEVGIIQQMGFPGYFLIVSDFIKWAKTHGIP 361

Query: 360  VGPGRGSGAGSLVAYVLKITDLDPLAYDLLFERFLNPERVSMPDFDVDFCMDGRDRVIDY 419
            VGPGRGSGAGSLVA+ L ITDLDPL + LLFERFLNPERVSMPDFD+DFC + R+ VIDY
Sbjct: 362  VGPGRGSGAGSLVAWSLTITDLDPLRFGLLFERFLNPERVSMPDFDIDFCQERREEVIDY 421

Query: 420  VAEAYGRNAVSQIITFGTMAAKAVVRDVARVQGKSYGLADRLSKMIPFE--VGMTLEKAY 477
            V + YG++ V+QIITFGT+ A+AV+RDV RV     G  DRL KM+P      +TL +A 
Sbjct: 422  VQDRYGKDRVAQIITFGTLQARAVLRDVGRVLQMPLGQVDRLCKMVPNNPAAPVTLAQAI 481

Query: 478  EQEEILRDFLKGDEDAREIWDMALKLEGVTRGTGKHAGGVVIAPTKLTDFSPIACDEEGG 537
            + E  L++    +   + + + AL+LEG+ R    HA G+VI    LT+  P+  D    
Sbjct: 482  DIEPRLKEARDAEPAVKTLLETALELEGLYRNASTHAAGIVIGDRPLTELVPLYQDPRST 541

Query: 538  GLVTQFDKDDVEAAGLVKFDFLGLRTLTIIKWAMEIINREQAKKNLPDLNIDFIPLDDRK 597
               +QF+   VE AGLVKFDFLGL+TLT++  A   + R  A K+   L     PLDD +
Sbjct: 542  IPASQFNMKWVEPAGLVKFDFLGLKTLTVLDRARGYLERRGAAKDWNSL-----PLDDAR 596

Query: 598  TYELLQKAETTAVFQLESRGMKELIKKLKPDCLEDLIALVALFRPGPLQSGMVDDFINRK 657
            TYEL+   +T  VFQLES+GM++ ++K++   +E++ AL++L+RPGP++  M+D +I+RK
Sbjct: 597  TYELMASGQTVGVFQLESQGMRDTLRKMRCGSIEEITALISLYRPGPME--MIDTYIDRK 654

Query: 658  HGRAELAYPHSDYQYEGLKPVLAPTYGIILYQEQVMQIAQVMAGYTLGGADMLRRAMGKK 717
             GRAE+     DY +  LK VL  TYG+I+YQEQVM+IAQV+AGY+LG AD+LRRAMGKK
Sbjct: 655  FGRAEV-----DYLHPSLKEVLTETYGVIIYQEQVMKIAQVLAGYSLGEADLLRRAMGKK 709

Query: 718  KPEEMAKQRGGFIEGCVANNIDADLAGNIFDLVEKFAGYGFNKSHSAAYGLVSYQTAWLK 777
            K EEM  QR  F++G     +    +G+IFDLV KFAGYGFNKSH+AAY L+S+QT WLK
Sbjct: 710  KKEEMDFQRLRFVKGAAEKAVPEAQSGSIFDLVAKFAGYGFNKSHAAAYALISFQTGWLK 769

Query: 778  THYPAPFMAAVLSADMHNTDKVVVLVEEVRSMKLRLDAPDVNFSDFKFTV---NNDGRIV 834
             + P  F AA +S D+ NTDK+ V  ++ +   + + APD+N S   F V   ++ G ++
Sbjct: 770  ANQPVEFFAASMSLDLSNTDKLAVFYQDAKRFDVPVLAPDINRSSADFDVAWDDDKGAVL 829

Query: 835  YGLGAIKGVGEGPVEAIVEARAQGGPFKDLFDFCERIDLKRVNKRTLDALVRSGALDRLG 894
            Y LGAI+ VG   ++ ++E R  GG F D+FDF ER+D + VNKR L+ L ++GA D   
Sbjct: 830  YALGAIRNVGLEAMKHVIEVRETGGRFADIFDFLERVDPRSVNKRALEGLAKAGAFD--- 886

Query: 895  PHFHDEIKAYHANIDINRATLLSALGEAIKAAEQAAHTADSGHVDLFGSMFDAADVDVYA 954
                        +I  NR  LL      +   +  A    S  V LFG   D A      
Sbjct: 887  ------------SIHTNRRQLLEQADVLMAYCQSVAAERASSQVSLFGG--DQAHA-ARP 931

Query: 955  NHRKVRELTLKERLKGEKDTLGLYLTGHPIDEYETEIRR----FARQRIVDLKPSRETQT 1010
              + V      ERL  E   +G YL+GHP+DE  + ++R    F  + I   +   E   
Sbjct: 932  RLKSVEPWVGPERLDHELSAVGFYLSGHPLDEMTSALKRKRVTFVAEAIPLAESGHEAFQ 991

Query: 1011 IAGMIIALRVMKN-KKGDKMGFVTLDDRSGRIEASLFADAFMAAQSLLQTDAMVVV---- 1065
            +AG++   +   + + G+K  FVT  D +G  E     +     + +L+  A V+V    
Sbjct: 992  MAGVVRRKQERASARTGEKFAFVTFSDPTGEFECLFPPEQLRKCREVLEPGASVMVRVRA 1051

Query: 1066 ---EGEVS------------NDDFSGGLRLRVKQVMTMEDARTKLAESLRLKV 1103
               EGEV              DD + GLR+ V        AR+  AE+L+ ++
Sbjct: 1052 KSSEGEVRFFGDDASQMDNLLDDANIGLRIHV-------SARSADAEALKARL 1097