Pairwise Alignments

Query, 452 a.a., regulatory intramembrane protein RIP zinc protease from Pseudomonas putida KT2440

Subject, 355 a.a., serine endoprotease, periplasmic (NCBI) from Escherichia coli BW25113

 Score = 42.0 bits (97), Expect = 3e-08
 Identities = 23/66 (34%), Positives = 38/66 (57%), Gaps = 1/66 (1%)

Query: 227 VLAEIDPKGPAAAAGLKTGDKLLALDDLAVTEWQQVVDRV-RARPDAKVVVRVERDGAAL 285
           V+ E+ P GPAA AG++  D ++++D+       + +D+V   RP + + V V RD   L
Sbjct: 283 VVNEVSPDGPAANAGIQVNDLIISVDNKPAISALETMDQVAEIRPGSVIPVVVMRDDKQL 342

Query: 286 ELPVTL 291
            L VT+
Sbjct: 343 TLQVTI 348



 Score = 25.8 bits (55), Expect = 0.002
 Identities = 12/29 (41%), Positives = 16/29 (55%)

Query: 131 VIGAVDSGSLAASAGLTAGQEIVSVDGKP 159
           V+  V     AA+AG+     I+SVD KP
Sbjct: 283 VVNEVSPDGPAANAGIQVNDLIISVDNKP 311