Pairwise Alignments

Query, 813 a.a., Phage tail tape meausure protein, lambda family from Pseudomonas putida KT2440

Subject, 1031 a.a., Phage tail length tape-measure protein 1 from Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

 Score = 68.9 bits (167), Expect = 1e-15
 Identities = 85/380 (22%), Positives = 150/380 (39%), Gaps = 29/380 (7%)

Query: 407 AKKLLGQFDTAEEGYKRQIALINTETDKRKEATEVAKLQFELESGNLAG--LSAKQQERL 464
           A++LL Q+   +   + QI      T ++        L F+    +L+G  L+A +Q  L
Sbjct: 619 ARRLLLQYSQQQAQTEGQITAAKLSTTEKMTEAHKQLLSFQQRIADLSGKKLTADEQSVL 678

Query: 465 KGLAAELDQLKKLKQAKEDDKEVAGFDASVKRQLDIDQRALDAP----------LLNAYS 514
                    L+KL  +++D +     +   K+ L +  +  D            L     
Sbjct: 679 AHKDEIALALQKLDISQQDLQHQNALNELKKKTLTLTSQLADEESRVRQQHAMALATMGM 738

Query: 515 TDEMKQRVLDLLAIEQDYQDQLEDLRQRHEA-GDVSDSVYERETEILSDALEKRRAMQEK 573
            D+ + R  + L I+Q YQ+QLE L++  +A G      Y +  + L  +L++R A    
Sbjct: 739 GDQQRGRYEERLKIQQHYQEQLEQLKRDSKAKGTYGSDEYRQAEQALKGSLDRRLAEWAD 798

Query: 574 YYQDVDAMQQNGTAGFISGFATQAEAAMDLYSNMQSVGSAAFSSLTDMLTEWAETGKLNA 633
           Y   VDA Q + T G             ++    ++V + AF+ + D +  +A TGK + 
Sbjct: 799 YNAKVDAAQGDWTLGASRALDNFLAQGGNVAGMTENVFTNAFNGMADSIANFAVTGKGSF 858

Query: 634 KDFAATFIQSIGHSLLAYAAAQVAMAGLNAFTAMIGVPFVGPAIAPGAAIAAAAAAGVLM 693
           +    + +  +       AA+++    L +  AM G         P  A ++AA + +  
Sbjct: 859 RSLTVSILADLAKMEARIAASKL----LGSVLAMFGFGTSAGGSTPSGAYSSAALSVIPN 914

Query: 694 TGVG---SALSGQAHGGMENIPREGTWLLDGGERVLSPAQNRDLTGYLQRANSVDATSKP 750
              G   SA   Q  G + N P    +    G  V+  A    +    + A+        
Sbjct: 915 ADGGVYRSAGLSQYSGSIVNRPT--FFAFAKGAGVMGEAGPEAILPLRRGADGKLGVVAA 972

Query: 751 GGGAM-------NVEVHNYA 763
           G G M       N+E+HN A
Sbjct: 973 GSGGMAMFAPEYNIEIHNDA 992



 Score = 29.6 bits (65), Expect = 0.001
 Identities = 35/100 (35%), Positives = 41/100 (41%), Gaps = 9/100 (9%)

Query: 316 DRYLPPVRIYNAFKNVDAI-GKTISGAKAQMDGLATGYGSLIASFDEKPGQGSTNQIKEL 374
           DR L     YNA   VDA  G    GA   +D      G+ +A   E      TN    +
Sbjct: 790 DRRLAEWADYNA--KVDAAQGDWTLGASRALDNFLAQGGN-VAGMTENV---FTNAFNGM 843

Query: 375 ADLLARLREGQAGSFTALTTDQQA--AAKAAEAAAKKLLG 412
           AD +A       GSF +LT    A  A   A  AA KLLG
Sbjct: 844 ADSIANFAVTGKGSFRSLTVSILADLAKMEARIAASKLLG 883