Pairwise Alignments

Query, 383 a.a., Succinyl-diaminopimelate desuccinylase from Pseudomonas putida KT2440

Subject, 393 a.a., N-succinyl-L,L-diaminopimelate desuccinylase (EC 3.5.1.18) from Variovorax sp. SCN45

 Score =  394 bits (1012), Expect = e-114
 Identities = 211/388 (54%), Positives = 262/388 (67%), Gaps = 14/388 (3%)

Query: 7   LSPTLQLACDLIRRPSVTPVDADCQAQMMNRLGAVGFQLEPMRIEDVD----NFWATHGS 62
           +S TLQLA  LI RPSVTP DA CQ  +  RL  +GF LE +     D    N WA    
Sbjct: 1   MSRTLQLAEQLISRPSVTPDDAGCQQILGERLALLGFTLETIESGPADFRVTNLWAVRRP 60

Query: 63  QDGPV----LCFAGHTDVVPTGPVQQWQHEPFEALIDADGMLCGRGAADMKGSLASMVIA 118
            D       L FAGHTDVVPTGPV+QW   PF      DG L GRGA DMK S+A+ V +
Sbjct: 61  ADAAATTRTLVFAGHTDVVPTGPVEQWTSHPFTPT-HRDGKLYGRGACDMKTSVAAFVTS 119

Query: 119 SERFVQDYPNHRGKVAFLITSDEEGPAHHGTKAVVERLKARNERLDWCIVGEPSSTTLLG 178
            E F+Q  P  R  +A L+TSDEEGP   GT  V   L AR E +D+CIVGEP++    G
Sbjct: 120 IEDFLQAVPEPRLTLALLLTSDEEGPGVDGTVVVCNTLAARGEVIDYCIVGEPTAVERCG 179

Query: 179 DVVKNGRRGSLGAKLTIRGKQGHVAYPHLARNPIHLAAPALAEL----AAEHWDEG-NAF 233
           D++KNGRRG++  KLT++G QGH+AYPHLA+NP+H  APALAEL    AA  WD   N +
Sbjct: 180 DMIKNGRRGTMSGKLTVKGVQGHIAYPHLAKNPVHSVAPALAELVAINAAGGWDAASNPY 239

Query: 234 FPPTSFQISNLNSGTGATNVVPGELTALFNFRFSTESTVEGLQARVSAILDKHELDWSVD 293
           F PTS+QISN +SGTGA+NV+PG     FNFRFSTEST E LQ RV A+LD H++D+++ 
Sbjct: 240 FQPTSWQISNFHSGTGASNVIPGSAVIDFNFRFSTESTPESLQQRVHAVLDAHQVDYTLA 299

Query: 294 WALSGLPFLTEPGELLDAVAASIKGVTGRDTQPSTSGGTSDGRFIATMGTQVVELGPVNA 353
           W + GLPFLT PGEL+ AV  +I+  TG +T+ STSGGTSD RFIA +  QVVELGPVNA
Sbjct: 300 WTIGGLPFLTTPGELVTAVQGAIRDETGIETELSTSGGTSDARFIAKICRQVVELGPVNA 359

Query: 354 TIHQVDERILASDLDLLTEIYYQTLVRL 381
           +IH++DE I  ++++ L  IY +TL +L
Sbjct: 360 SIHKIDEHIDVAEIETLKNIYVRTLKQL 387