Pairwise Alignments

Query, 383 a.a., Succinyl-diaminopimelate desuccinylase from Pseudomonas putida KT2440

Subject, 380 a.a., N-succinyl-L,L-diaminopimelate desuccinylase (EC 3.5.1.18) from Sphingobium sp. HT1-2

 Score =  258 bits (660), Expect = 1e-73
 Identities = 157/379 (41%), Positives = 219/379 (57%), Gaps = 14/379 (3%)

Query: 1   MTAPAELSPTLQLACDLIRRPSVTPVDADCQAQMMNRLGAVGFQLEPMRIE-----DVDN 55
           MT  +     L LA  L+  PSVTP   D  A++   L  +GF ++           V+N
Sbjct: 1   MTKTSTNHDALALAERLLACPSVTPAVGDVFAELEAMLVPLGFTVDRFVSGVAPDGPVEN 60

Query: 56  FWATHGSQDGPVLCFAGHTDVVPTGPVQQWQHEPFEALIDADGMLCGRGAADMKGSLASM 115
             A   +  GP   FAGH DVVP G    W  +PF  ++  D +L GRGA DMKG++A+ 
Sbjct: 61  LLAWRTTGAGPHFAFAGHLDVVPPG--HGWASDPFTPVVRGD-LLYGRGAVDMKGAIAAF 117

Query: 116 VIASERFVQDYPNHRGKVAFLITSDEEGPAHHGTKAVVERLKARNERLDWCIVGEPSSTT 175
           V A        P   G ++ +IT DEEGPA +GT A+++R+ A     D C+VGEP+S+ 
Sbjct: 118 VAALHELPDALP---GTISLIITGDEEGPATYGTLALMDRMVAHGLHPDMCLVGEPTSSA 174

Query: 176 LLGDVVKNGRRGSLGAKLTIRGKQGHVAYPHLARNPIHLAAPALAELAAEHWDEGNAFFP 235
            LGDVVK GRRGS+   + + G QGHVAYPHLA NPI      LA++ AE  D G  +F 
Sbjct: 175 RLGDVVKIGRRGSVNMWIKVAGTQGHVAYPHLADNPIPALVRILAKIDAEVLDTGTDWFQ 234

Query: 236 PTSFQISNLNSGTGATNVVPGELTALFNFRFSTESTVEGLQARVSAILDKHELDWSVDWA 295
           P++ +I++L  G  A NV+P   TA  + RF+ + +   L  R+SAI        SV+  
Sbjct: 235 PSNIEITDLEVGNPAHNVIPASATARISIRFNDQHSGASLIDRISAIAASE--GGSVEAK 292

Query: 296 LSGLPFLTEPGELLDAVAASIKGVTGRDTQPSTSGGTSDGRFIATMGTQVVELGPVNATI 355
           +SG PFLT+PG L   ++ +I+ VTG +T+ ST+GGTSD RF++ +   V E G  NAT+
Sbjct: 293 ISGEPFLTQPGTLSTLISDAIRDVTGLETELSTTGGTSDARFLSRL-CPVAEFGLNNATM 351

Query: 356 HQVDERILASDLDLLTEIY 374
           H++DE +  +DL  LT IY
Sbjct: 352 HKLDEAVAVADLHDLTHIY 370