Pairwise Alignments

Query, 383 a.a., Succinyl-diaminopimelate desuccinylase from Pseudomonas putida KT2440

Subject, 379 a.a., succinyl-diaminopimelate desuccinylase from Magnetospirillum magneticum AMB-1

 Score =  269 bits (688), Expect = 8e-77
 Identities = 168/375 (44%), Positives = 220/375 (58%), Gaps = 10/375 (2%)

Query: 13  LACDLIRRPSVTPVDADCQAQMMNRLGAVGFQLEPMRIE----DVDNFWATHGSQDGPVL 68
           LA  LIR PSVTP DA     +   L  +GF    +R      ++ N +A  G++  P L
Sbjct: 9   LAQALIRCPSVTPEDAGALDVLAGALEELGFACHHIRSATGGPEIRNLYARLGTE-APNL 67

Query: 69  CFAGHTDVVPTGPVQQWQHEPFEALIDADGMLCGRGAADMKGSLASMVIASERFVQDYPN 128
           CFAGHTDVVP G  + W  EPF A ID  G L GRG+ADMKG++A  V A  R ++D   
Sbjct: 68  CFAGHTDVVPPG--KGWTVEPFAAGID-QGRLFGRGSADMKGAIACFVAAVARLLEDGAP 124

Query: 129 HRGKVAFLITSDEEGPAHHGTKAVVERLKARNERLDWCIVGEPSSTTLLGDVVKNGRRGS 188
            +G ++ LIT DEEGPA  GT  V++ L AR ER+D CIVGEP++   LGD++K GRRGS
Sbjct: 125 -KGSLSLLITGDEEGPAVDGTVKVLDWLAARGERIDCCIVGEPTNPRKLGDMMKIGRRGS 183

Query: 189 LGAKLTIRGKQGHVAYPHLARNPIHLAAPALAELAAEHWDEGNAFFPPTSFQISNLNSGT 248
           L  +LT+ G QGH AYPHLA NPI      L  L     DEG   F  ++  ++ ++ G 
Sbjct: 184 LNCRLTVFGTQGHSAYPHLADNPIPRLLDILRRLTEAPLDEGTPHFQASTLALTTVDVGN 243

Query: 249 GATNVVPGELTALFNFRFSTESTVEGLQARVSAILDKHELDWSVDWALSGLPFLTEPGEL 308
            ATNV+P E  A FN RF+   +   L+  +   + +   +  +   +SG  FLT PG L
Sbjct: 244 PATNVIPAEARAGFNIRFNDLHSGASLERWIRDTVAQAGGEVEIKVEVSGESFLTPPGAL 303

Query: 309 LDAVAASIKGVTGRDTQPSTSGGTSDGRFIATMGTQVVELGPVNATIHQVDERILASDLD 368
            DA+A +   VTG   + STSGGTSD RFI      VVE G V  T+H+ DE +  +D++
Sbjct: 304 SDALAEAAFEVTGLRPELSTSGGTSDARFIKN-HCPVVEFGLVGQTMHKSDEHVSVADME 362

Query: 369 LLTEIYYQTLVRLLA 383
            LTEIY + LVRL A
Sbjct: 363 ALTEIYRRVLVRLAA 377