Pairwise Alignments

Query, 383 a.a., Succinyl-diaminopimelate desuccinylase from Pseudomonas putida KT2440

Subject, 381 a.a., succinyldiaminopimelate desuccinylase (EC 3.5.1.18) from Kangiella aquimarina DSM 16071

 Score =  436 bits (1121), Expect = e-127
 Identities = 221/378 (58%), Positives = 275/378 (72%), Gaps = 3/378 (0%)

Query: 7   LSPTLQLACDLIRRPSVTPVDADCQAQMMNRLGAVGFQLEPMRIEDVDNFWAT-HGSQDG 65
           +S TL L+ DLI RPSVTP DA CQ  MM  L A+GF+ E M  ED  NFW+  HG  +G
Sbjct: 1   MSETLALSKDLINRPSVTPEDAGCQQMMMQYLEALGFKNEIMNFEDTSNFWSLRHGRTEG 60

Query: 66  PVLCFAGHTDVVPTGPVQQWQHEPFEALIDADGMLCGRGAADMKGSLASMVIASERFVQD 125
           PV  FAGHTDVVP GP++ W   PFEA  + +G L GRGA+DMK SLA+M++A++RFV+D
Sbjct: 61  PVFVFAGHTDVVPAGPLENWHTPPFEAT-EKEGYLYGRGASDMKSSLAAMLVATKRFVKD 119

Query: 126 YPNHRGKVAFLITSDEEGPAHHGTKAVVERLKARNERLDWCIVGEPSSTTLLGDVVKNGR 185
           YP H G + FLITSDEEGP  +GT  VVE L  RN+ LD+C+VGEPSS+   GDV+KNGR
Sbjct: 120 YPEHIGSIGFLITSDEEGPFINGTVRVVEELMKRNQPLDYCVVGEPSSSEQFGDVIKNGR 179

Query: 186 RGSLGAKLTIRGKQGHVAYPHLARNPIHLAAPALAELAAEHWDEGNAFFPPTSFQISNLN 245
           RGSL   LTI+G QGHVAYPHLA N IH +  AL ELA   WD+GN FFP TSFQI+ + 
Sbjct: 180 RGSLTGFLTIKGTQGHVAYPHLADNAIHKSLKALDELAHTEWDQGNQFFPATSFQIAIIK 239

Query: 246 SGTGATNVVPGELTALFNFRFSTESTVEGLQARVSAILDKHELDWSVDWALSGLPFLTEP 305
           +GT A NV+PGE    FNFR+STE+T + LQ +V A+LDK+ L++ ++W L+G PFLT+ 
Sbjct: 240 AGT-AGNVIPGEKYVEFNFRYSTETTHQELQQKVVAVLDKYNLEYDLNWKLNGEPFLTDH 298

Query: 306 GELLDAVAASIKGVTGRDTQPSTSGGTSDGRFIATMGTQVVELGPVNATIHQVDERILAS 365
           G LL A   +I+ V   +T P T+GGTSDGRFIA  G ++VE+GPVN TIHQ++E +   
Sbjct: 299 GHLLTAARNAIRAVCQINTAPLTTGGTSDGRFIAKTGAEIVEIGPVNKTIHQINECVKIE 358

Query: 366 DLDLLTEIYYQTLVRLLA 383
           DLD LTE+YYQ LV LLA
Sbjct: 359 DLDKLTEVYYQILVELLA 376