Pairwise Alignments

Query, 366 a.a., RND membrane fusion protein from Pseudomonas putida KT2440

Subject, 368 a.a., secretion protein HylD from Pseudomonas simiae WCS417

 Score =  176 bits (446), Expect = 9e-49
 Identities = 116/350 (33%), Positives = 169/350 (48%), Gaps = 6/350 (1%)

Query: 6   LSIALPAAAALLLAACGQEA---APPAAPRPALVVQPQPAEAAADSYPGEVRARFEPELA 62
           L +  P A  ++L  C  +A   A    PRP L  + + A     +Y G V AR E +L 
Sbjct: 6   LRLLTPLALLIILNGCNSKADTAAETPLPRPVLAAKVEAAGTQQSAYTGVVAARTESDLG 65

Query: 63  FRIGGKVSKRLVEEGQRVKADQPLAELDPQDVRLQLEANRAQLAAAEANLALVRAERDRY 122
           FR+ GKV +R V+ GQ V     L  LD  D  L L + + ++ AA+A L   R + +RY
Sbjct: 66  FRVSGKVIERKVDPGQHVSRGDTLLVLDIGDFELALRSAKNRVHAAQAQLRQRRDDENRY 125

Query: 123 QKLLERQMVSHSQYDNAENLYRAGLARLKQAKAEFDVAGNQAEYAVLRAPQAGVIAKRQV 182
           Q+L     VS   +D +  L R   A L  A+++     N+  Y+VL+A   G+I   +V
Sbjct: 126 QRLASTGAVSRQIFDQSATLLRVAEAELASAQSDASQIENRRTYSVLKADGDGIITDVRV 185

Query: 183 EVGQVVAAGQTVFTLAADGEREVAIGLPEQQFARFAVGQPVSVELWSHPQARFQGRIREL 242
           + GQVVA GQ V  LA DG RE  + LPE Q  R    Q      +  P       +REL
Sbjct: 186 DRGQVVAEGQIVARLAHDGAREAIVNLPENQ--RDQAAQKALAFPFGAPDQAVTATLREL 243

Query: 243 SPAADPRSRTFAARIAFTTAAVPAELGQSARVFIAKDGLI-PLAVPLSAVTAENGQAYVW 301
           S +ADP +RT+ AR     A     LG +  V +  +G      VP+ A+        VW
Sbjct: 244 SASADPTTRTYRARYVLHGAVDRFALGSTITVRLQGNGQAQQTRVPIGALLDSGQGTGVW 303

Query: 302 RVNKESRLERATVRLGAYGSDSVPVLEGLDPGDWVVAAGGHVLREGQEVR 351
            +  + ++  A V++ + G +   +  G+ PG  +VA G H+L  G  VR
Sbjct: 304 LIGADDKVSFAPVKVASLGQEDALLDSGVSPGQVIVALGAHLLHSGDPVR 353