Pairwise Alignments

Query, 366 a.a., RND membrane fusion protein from Pseudomonas putida KT2440

Subject, 433 a.a., secretion protein HlyD from Pseudomonas simiae WCS417

 Score =  108 bits (270), Expect = 3e-28
 Identities = 88/318 (27%), Positives = 141/318 (44%), Gaps = 9/318 (2%)

Query: 51  GEVRARFEPELAFRIGGKVSKRLVEEGQRVKADQPLAELDPQDVRLQLEANRAQLAAAEA 110
           G V A     +  R+GG++ K   EEGQ VKA   LAE+DP+  +  L   +  L   +A
Sbjct: 86  GTVTALNTINVRSRVGGELVKIAFEEGQMVKAGDLLAEIDPRSYQNALLQAQGTLMQNQA 145

Query: 111 NLALVRAERDRYQKLLERQMVSHSQYDNAENLYRAGLARLKQAKAEFDVAGNQAEYAVLR 170
            L   + +  RY+ L  +  ++    D AE L       +K  +   D A    E+  +R
Sbjct: 146 QLKNAQVDVQRYRDLYAQDSIAKQTLDTAEALVLQYQGTVKTNQGAVDDAKLNLEFTKIR 205

Query: 171 APQAGVIAKRQVEVGQVVAAGQTVF--TLAADGEREVAIGLPEQQ----FARFAVGQPVS 224
           AP +G +  RQV+VG +VAA  T F   +       VA  LPE        R+  G  + 
Sbjct: 206 APISGRVGLRQVDVGNLVAANDTTFLAVITQTQPISVAFTLPENTLETVLTRYHAGNKLP 265

Query: 225 VELWSHPQARFQ--GRIRELSPAADPRSRTFAARIAFTTAAVPAELGQSARVFIAKDGLI 282
           VE W     + Q  G ++ L    D  + T   +  F          Q   V +  D L 
Sbjct: 266 VEAWDRGDVKQQAVGVLQSLDNQIDVTTGTLKFKARFDNKDQALFPNQFVNVHLLADTLH 325

Query: 283 PLAV-PLSAVTAENGQAYVWRVNKESRLERATVRLGAYGSDSVPVLEGLDPGDWVVAAGG 341
            + + P +A+   N   +V+ ++ + +++   + +G    D+  + EGL  GD VV  G 
Sbjct: 326 NVVLAPSAAIQFGNTGTFVYVLDGDKKVKVQPLVVGDTDGDNTVIKEGLKAGDRVVLEGT 385

Query: 342 HVLREGQEVRPVDRSNRV 359
             L++G E+  V+ S+ V
Sbjct: 386 DRLKDGSEIEVVNDSSEV 403