Pairwise Alignments

Query, 366 a.a., RND membrane fusion protein from Pseudomonas putida KT2440

Subject, 362 a.a., HlyD family secretion protein from Pseudomonas putida KT2440

 Score =  188 bits (478), Expect = 2e-52
 Identities = 116/339 (34%), Positives = 175/339 (51%), Gaps = 2/339 (0%)

Query: 17  LLAACGQEAAPPAAPRPALVVQPQPAEAAAD-SYPGEVRARFEPELAFRIGGKVSKRLVE 75
           +L  C +E  P   PR   V Q QP + AA  +  G+V+AR + +L+FR+GGK+  R V+
Sbjct: 17  MLTGCSKEEVPETLPRVG-VQQVQPTDFAARVTLTGDVQARVQTDLSFRVGGKIISRSVD 75

Query: 76  EGQRVKADQPLAELDPQDVRLQLEANRAQLAAAEANLALVRAERDRYQKLLERQMVSHSQ 135
            G  VKA+Q LA LDP+D++  +++ +A++ AA+A +    A   R QKLL +   S S+
Sbjct: 76  VGDHVKANQVLARLDPKDLQNNVDSAKAEVFAAQARVTQTSAAFVRQQKLLPKGYTSQSE 135

Query: 136 YDNAENLYRAGLARLKQAKAEFDVAGNQAEYAVLRAPQAGVIAKRQVEVGQVVAAGQTVF 195
           YD AE   R+  + LK A+A+   A  Q  Y  L +  AGVI +RQ EVGQVV A   +F
Sbjct: 136 YDAAEAALRSNQSALKAAQAQLANANEQLSYTALVSEAAGVITERQAEVGQVVQATMPIF 195

Query: 196 TLAADGEREVAIGLPEQQFARFAVGQPVSVELWSHPQARFQGRIRELSPAADPRSRTFAA 255
           +LA DG+R+    + E           V V L   P+ +  G +RE++P    +S T   
Sbjct: 196 SLAVDGDRDAVFNVYESLLVAPPSDAGVVVSLLDDPKVQAHGFVREITPTVSAQSGTVQV 255

Query: 256 RIAFTTAAVPAELGQSARVFIAKDGLIPLAVPLSAVTAENGQAYVWRVNKESRLERATVR 315
           ++         +LG          G   + +P SA+T    +  VW V +  ++E   V 
Sbjct: 256 KVGLKDVPPGMQLGAPVTATTNAQGRPSIELPWSALTKALHEPAVWVVGEGDKVELRKVE 315

Query: 316 LGAYGSDSVPVLEGLDPGDWVVAAGGHVLREGQEVRPVD 354
           +  Y +  + V  GL  G+ VV  GG +L  G +V  VD
Sbjct: 316 IRRYLTGKIVVASGLKGGETVVVNGGQLLHPGMQVLKVD 354