Pairwise Alignments

Query, 366 a.a., RND membrane fusion protein from Pseudomonas putida KT2440

Subject, 435 a.a., multidrug efflux transport system - putative membrane fusion protein from Pseudomonas putida KT2440

 Score =  112 bits (279), Expect = 2e-29
 Identities = 86/318 (27%), Positives = 149/318 (46%), Gaps = 9/318 (2%)

Query: 51  GEVRARFEPELAFRIGGKVSKRLVEEGQRVKADQPLAELDPQDVRLQLEANRAQLAAAEA 110
           G V A     +  R+ G++ K   +EGQRVKA   LAE+DP+  R+ L+     LA  +A
Sbjct: 85  GTVTATNTVNVRSRVAGELVKIHFKEGQRVKAGDLLAEIDPRPYRIALQQAEGTLAQNQA 144

Query: 111 NLALVRAERDRYQKLLERQMVSHSQYDNAENLYRAGLARLKQAKAEFDVAGNQAEYAVLR 170
            L   + +  RY+ L     ++    D AE         +K  +A+ + A    ++  +R
Sbjct: 145 QLKNAQVDLARYKGLYAEDSIAKQTLDTAEAQVAQFQGLVKTNQAQVNDARLNLDFTQIR 204

Query: 171 APQAGVIAKRQVEVGQVVAAGQT--VFTLAADGEREVAIGLPEQQFA----RFAVGQPVS 224
           AP +G +  RQ+++G +VAA  T  +  +       VA  LPE + +    R+  G  + 
Sbjct: 205 APISGRVGLRQLDLGNLVAANDTTALVVITQTEPINVAFTLPETELSTVLERYRSGASLP 264

Query: 225 VELWSHPQARFQ--GRIRELSPAADPRSRTFAARIAFTTAAVPAELGQSARVFIAKDGLI 282
           VE W    ++ Q  G +  +    D  + T   +  F    +     Q   V +  D L 
Sbjct: 265 VEAWDRGDSKLQSTGVLGSIDNQIDTTTGTLKFKGRFENKDLALFPNQFVNVRLLADTLK 324

Query: 283 PLAV-PLSAVTAENGQAYVWRVNKESRLERATVRLGAYGSDSVPVLEGLDPGDWVVAAGG 341
            + + P +A+   N   + + VN++S +    +++GA   ++  +L+GL  GD +V  G 
Sbjct: 325 QVVMAPAAAIQFGNDGTFAYVVNEQSTVNVRKLKVGASDGENSVILDGLKAGDRLVLEGT 384

Query: 342 HVLREGQEVRPVDRSNRV 359
             LREG +V  V+ S++V
Sbjct: 385 DRLREGTKVEVVEDSSQV 402