Pairwise Alignments

Query, 366 a.a., RND membrane fusion protein from Pseudomonas putida KT2440

Subject, 406 a.a., RND efflux membrane fusion protein-related protein from Pseudomonas putida KT2440

 Score =  108 bits (269), Expect = 3e-28
 Identities = 105/383 (27%), Positives = 159/383 (41%), Gaps = 50/383 (13%)

Query: 1   MLRHALSIALPAAAALLLAACG-------QEAAPPAAPRPALVVQPQPAEAAADSYP--- 50
           MLR  + I L     ++LA  G       Q+     AP+P + V    A A A+  P   
Sbjct: 22  MLRRRMLIMLAVVLLIVLALGGYKAFSIYQQIQMFTAPKPPITV----AAAMAEQRPWQE 77

Query: 51  -----GEVRARFEPELAFRIGGKVSKRLVEEGQRVKADQPLAELDPQDVRLQLEANRAQL 105
                G ++A    +L+  + G V     + GQ+VKA Q L +L+        +   A L
Sbjct: 78  RLPAVGSLKALQGVDLSLEVEGIVKSLHFDSGQQVKAGQLLLQLND-------DQETALL 130

Query: 106 AAAEANLALVRAERDRYQKLLERQMVSHSQYDNAENLYRAGLARLKQAKAEFDVAGNQAE 165
             A A+L L + +  R  +L+    +S  ++D   + YR   A ++Q KA       Q  
Sbjct: 131 GTALADLGLAKVDFGRGSQLVGDSAISRGEFDRLSSQYRRNQAVVEQLKA-------QKI 183

Query: 166 YAVLRAPQAGVIAKRQVEVGQVVAAGQTVFTLAADGEREVAIGLPEQQFARFAVGQPVSV 225
              + AP +G I  RQV++GQ +AAG  + TL       V   +PEQ     ++GQ V V
Sbjct: 184 KKRINAPFSGTIGIRQVDIGQYLAAGTVIATLQDTSSLYVDFNVPEQALPHLSLGQQVLV 243

Query: 226 ELWSHPQARFQGRIRELSPAADPRSRTFAARIAFTTAAVPAELGQSARVFIAKDGLIP-L 284
           ++ ++P  RF G +  ++P  +  +R    R            G  A + I      P +
Sbjct: 244 QVAAYPGQRFPGSLSAINPKVEETTRNLLVRATMANPDGKLLPGMFASLLILLPNPQPQV 303

Query: 285 AVPLSAV--TAENGQAYVWRVNKESR--------------LERATVRLGAYGSDSVPVLE 328
            VP SA+  T      YV    K+                 E+ TV+ G      V V E
Sbjct: 304 VVPESAITYTLYGNSVYVASPRKDKDGKPVYDDKGQPQLVAEQRTVKTGERRDGVVVVSE 363

Query: 329 GLDPGDWVVAAGGHVLREGQEVR 351
           GL  G+ VV AG   L  G  +R
Sbjct: 364 GLQAGEQVVTAGQLKLTPGAAIR 386