Pairwise Alignments

Query, 366 a.a., RND membrane fusion protein from Pseudomonas putida KT2440

Subject, 366 a.a., Probable Co/Zn/Cd efflux system membrane fusion protein from Hydrogenophaga sp. GW460-11-11-14-LB1

 Score =  194 bits (492), Expect = 4e-54
 Identities = 133/352 (37%), Positives = 192/352 (54%), Gaps = 13/352 (3%)

Query: 10  LPAAAALLLAACGQEAAPPAAPRPALVVQPQPAEAAADS-YPGEVRARFEPELAFRIGGK 68
           L   AAL L+AC +  AP    R   ++        A S Y GEVRAR E  L FR+GGK
Sbjct: 8   LIVTAALALSACSRPPAPEEPIRSVKLLTVGTGNVVARSEYAGEVRARTESRLGFRVGGK 67

Query: 69  VSKRLVEEGQRVKADQPLAELDPQDVRLQLEANRAQLAAAEANLALVRAERDRYQKLLER 128
           +  R  E GQRVK  Q LA+LD QD+ L  +A +AQ++AA+    L  A+  RYQ L  +
Sbjct: 68  LVARPAEVGQRVKPGQLLAQLDAQDLALSSQAAQAQVSAAQTQRDLAAADLKRYQDLQAQ 127

Query: 129 QMVSHSQYDNAENLYRAGLARLKQAKAEFDVAGNQAEYAVLRAPQAGVIAKRQVEVGQVV 188
             VS ++ +  +   ++  A L+QAKA+  V GNQA YA L A   GV+   + EVGQVV
Sbjct: 128 GFVSGAEIERRQATLQSAEATLRQAKAQGAVQGNQAGYARLLADGDGVVLSVEAEVGQVV 187

Query: 189 AAGQTVFTLAADGEREVAIGLPEQQFARFAVGQPVSVELW------SHPQARFQGRIREL 242
           AAG  V  +A DG R+V I +PE + A+   G    V LW      S   A  +  +RE+
Sbjct: 188 AAGTPVVRVARDGARDVVIAVPEDRVAQIRPGATAQVRLWAGAGAASAAAAPLEATVREV 247

Query: 243 SPAADPRSRTFAARIAFTT-AAVPAELGQSARVFI--AKDGLIPLAVPLSAVTAENGQAY 299
           + +AD  +RT+  +++    AAVP  LG +A V +  A  G   + +P SA+   +  + 
Sbjct: 248 AASADAATRTYQVKLSLPDGAAVP--LGATAYVTLGGAVAGPAVIKLPTSALMRADQGSA 305

Query: 300 VWRVNKES-RLERATVRLGAYGSDSVPVLEGLDPGDWVVAAGGHVLREGQEV 350
           VW  +  +  ++   V++     + + +L+GL PG+ VVA G HVL  GQ+V
Sbjct: 306 VWVFDAAAGTVQPRPVKVAGADGNEMVILDGLKPGEEVVATGVHVLSPGQKV 357