Pairwise Alignments

Query, 366 a.a., RND membrane fusion protein from Pseudomonas putida KT2440

Subject, 356 a.a., efflux RND transporter periplasmic adaptor subunit from Dickeya dianthicola ME23

 Score =  158 bits (400), Expect = 2e-43
 Identities = 116/343 (33%), Positives = 169/343 (49%), Gaps = 9/343 (2%)

Query: 14  AALLLAAC-GQEAAPPAAPRPALVVQPQPAEAAADSY-PGEVRARFEPELAFRIGGKVSK 71
           A + L  C GQ+ A    P+P   +Q Q      ++   GEV ARF+ +LAFR  G+V  
Sbjct: 12  AWIALTGCDGQKQALTPPPQPVKALQVQKVRYQNEAQISGEVTARFQADLAFRTEGRVIA 71

Query: 72  RLVEEGQRVKADQPLAELDPQDVRLQLEANRAQLAAAEANLALVRAERDRYQKLLERQMV 131
           RLV+ G RV+  Q LA LD  + +  ++  +A L +A A L L +    R QKLL    +
Sbjct: 72  RLVDVGSRVQKGQVLARLDDIEKKADVDVAQATLHSARATLQLKQRIFSRDQKLLTIHAI 131

Query: 132 SHSQYDNAENLYRAGLARLKQAKAEFDVAGNQAEYAVLRAPQAGVIAKRQVEVGQVVAAG 191
           S +++D A     +  A +  A++  D A +   Y  L++   GVI  RQ+EVGQVVA+ 
Sbjct: 132 SQAEWDQAREDLSSAQAGVVSAQSSLDTAKDALTYTELKSDADGVIVSRQLEVGQVVASA 191

Query: 192 QTVFTLAADGEREVAIGLPEQQFARFAVGQPVSVELWSHPQAR-FQGRIRELSPAADPRS 250
           QTV TLA DG R+    +PE        G  +SV L S         ++RE++P  +  S
Sbjct: 192 QTVLTLAHDGPRDAVFDVPEAILLNEHPGDDISVRLISARDGEALTAKVREIAPMLNEAS 251

Query: 251 RTFAARIAFTTAAVPAE--LGQSARVFIAKDGLIPLAVPLSAVTAENGQAYVWRVNK-ES 307
            T   +   TT  V A+  LG S    I  +    + +P  A+T+  G+  VW + + + 
Sbjct: 252 GTVQVK---TTLPVSAQWPLGASVVGNIVVNEQPGILLPPGALTSHQGKPAVWVIEEGKD 308

Query: 308 RLERATVRLGAYGSDSVPVLEGLDPGDWVVAAGGHVLREGQEV 350
            +    + +  Y S  V V  GL PG WVV  G   L  GQ V
Sbjct: 309 TVSLHEISVARYRSQDVVVTAGLTPGAWVVTEGSKFLIAGQHV 351