Pairwise Alignments

Query, 366 a.a., RND membrane fusion protein from Pseudomonas putida KT2440

Subject, 372 a.a., Multidrug resistance protein MdtE from Azospirillum sp. SherDot2

 Score =  218 bits (556), Expect = 2e-61
 Identities = 139/358 (38%), Positives = 199/358 (55%), Gaps = 13/358 (3%)

Query: 6   LSIALPAAAALL-----LAACG--QEAAPPAAPRPALV-VQPQPAEAAADS--YPGEVRA 55
           L+ A+ A  ALL     LA C   Q A+ PA      V V     E   DS  Y   +R 
Sbjct: 9   LASAVMATTALLTVAGLLAGCNETQSASTPAEAEVRPVRVATVTLEPLVDSVRYAAVIRP 68

Query: 56  RFEPELAFRIGGKVSKRLVEEGQRVKADQPLAELDPQDVRLQLEANRAQLAAAEANLALV 115
           R E ++ FR+GGKV+ RLVE G RV+   PLA LDP D++LQ+ A++AQLA+A+A+ A  
Sbjct: 69  RVEADVGFRVGGKVTARLVEVGTRVEPGMPLARLDPTDLQLQIRASQAQLASAQADAANA 128

Query: 116 RAERDRYQKLLERQMVSHSQYDNAENLYRAGLARLKQAKAEFDVAGNQAEYAVLRAPQAG 175
           R++  RY  L + +  +  +YD  +       +++++ +A+  V  N A+YA L A +AG
Sbjct: 129 RSDFQRYATLRQGEWTTRQEYDRRKTTLDKAESKVREVEAQLRVLDNSAQYATLVADEAG 188

Query: 176 VIAKRQVEVGQVVAAGQTVFTLAADGEREVAIGLPEQQFARFAVGQPVSVELWSHPQARF 235
           ++    +E GQVVA+GQT   +A  G  E  + +PEQ  A     Q ++VELWSHP    
Sbjct: 189 IVTATLIEPGQVVASGQTALRVARLGSLEAVVNIPEQSVAALP-RQTLAVELWSHPGRSI 247

Query: 236 QGRIRELSPAADPRSRTFAARIAFTTAAVPAELGQSARVFIAKDGLIPLA-VPLSAVTAE 294
            G +RE+SP+AD  +RTF A+I  T      +LG +A V  A D   P+A +PLSA+   
Sbjct: 248 AGSLREVSPSADANTRTFQAKITLTDPPPTVQLGMTATVIAAADHGAPIARLPLSALAQR 307

Query: 295 NGQAYVWRVN-KESRLERATVRLGAYGSDSVPVLEGLDPGDWVVAAGGHVLREGQEVR 351
             +  VW ++  + RLE   V + AY  D   +  GL  G+ VV AG H L  GQ+VR
Sbjct: 308 EQKPAVWVLSAPDDRLELRPVTVAAYAGDLALIGGGLKDGERVVTAGVHKLDAGQKVR 365