Pairwise Alignments

Query, 762 a.a., Sensor histidine kinase/response regulator from Pseudomonas putida KT2440

Subject, 890 a.a., Sensor histidine kinase RcsC from Xanthobacter sp. DMC5

 Score =  247 bits (630), Expect = 2e-69
 Identities = 180/623 (28%), Positives = 293/623 (47%), Gaps = 62/623 (9%)

Query: 11  LLELFSLEAEAQTQVLNAGLMALERNPTQADQLEACMRAAHSLKGAARIVGVDAGVSVAH 70
           LL  F  E      V +  L+  E++P  A  L    R  H++KG    +G+    S+AH
Sbjct: 4   LLREFLTETSESLDVADVELVKFEQDPNNAQILNNIFRLVHTIKGTCGFIGLPRLASLAH 63

Query: 71  VMEDCLVAAQEGRLRLTAEHIDALLQGTD----LLMRIA-TPGDA--GAQATLPVFLAQM 123
             E  +   +EGR  +T + +  +L   D    LL  +  T G    G    L   L  M
Sbjct: 64  AAETLMDRFREGR-PVTTDAVGLVLSTIDRIKLLLQHVEETEGSEPEGEDRDLISLLEAM 122

Query: 124 ASLLDPGASAMPVVPPAASVPPLATLPPAPMVMP------------AEPPEPEPEPALRR 171
           A  +D  A+  P  PP      L   P  P  +P             +P  P P PA   
Sbjct: 123 AEAVDAPAAPPPPAPPPQPAQTLER-PLLPGELPLDELDRIFRETKVDPLPPAPAPAAPP 181

Query: 172 KAGKRAGEGAERVLRVTADRLNSLLDLSSKSLVETQRLKPYLATLQRLKRMHGQGMQALD 231
           K        A  + +  AD  ++         V  Q ++ ++  L++L  M    +  L 
Sbjct: 182 KP-------APAMPKADADATHAAAQAGEAHGVAAQSIRVHVGVLEQLMTM----VSELV 230

Query: 232 GLRMQLEDTGQGNEVLEALAQTQRLLAETQRILQQQAADLDEFGWQASQRAQLLYDTALA 291
             R QL +  + ++  E     QRL   T                        L +  + 
Sbjct: 231 LTRNQLMEIARRHDEPEYKVSLQRLSNVTGE----------------------LQEAVMR 268

Query: 292 CRMRPFADVLTGQSRMVRDLGRSLGKPVRLVVEGEKTQVDRDVLEKLEAPLTHLLRNAVD 351
            RM+P  +      R+VRDL + LGK + L   G  T++DR VL++++ PLTH++RN+ D
Sbjct: 269 TRMQPIGNAWQKLPRIVRDLAQELGKQIELEQVGADTELDRQVLDQIKDPLTHMVRNSAD 328

Query: 352 HGIELPERRLLAGKPDEGVIRLRASHQAGMLSLELIDDGAGIDLERLRSSIVERALSPAD 411
           HG+E+PE+R  AGK + G+IRL A H+ G + +E+ DDG G+D+ R++   +E  L+   
Sbjct: 329 HGLEMPEQRRAAGKSERGLIRLSAYHEGGHVIVEISDDGRGLDVARIKQKALENGLATEA 388

Query: 412 TVARMSEAELLTFLFLPGFSLRDKVTEVSGRGVGLDAVQHLIRELRGSIELTQVAGQGCR 471
            +A+M ++++  F+F  GFS   KVT VSGRGVG+D V+  +  + G++++    G+G  
Sbjct: 389 ELAKMPDSQVFRFIFHAGFSTAQKVTNVSGRGVGMDVVRSNLESIGGTVDVRSRQGEGST 448

Query: 472 FHLQVPLTLSVVRSLVVEVGGEAYAFPLAHIERTLEVTA---EQIVQIEGRQHFWHEGRH 528
           F +++PLTL++V +L+V   GE +A P + +E  + V A    +I  +          R 
Sbjct: 449 FVIKIPLTLAIVPALIVRAAGERFALPQSAVEELVRVQAGSDHEITWLNNSPVLGLRDRL 508

Query: 529 IGLVAASQLLNRPAGQS--DEA---SLRVVVIREREQLYGVAVERLVGERVLVVMPLDPR 583
           + +V+   LL     +   DEA      +VV++   Q +GV VE +     +VV P+   
Sbjct: 509 LPIVSLGALLGLSPERDGRDEALWERALIVVMKVGHQTFGVVVEAVSHTEEIVVKPMASA 568

Query: 584 LGKVQDISSGALLDDGSVVLIVD 606
           L ++  +S   +L DG V++I+D
Sbjct: 569 LRQLPMVSGSTILGDGRVIMILD 591



 Score = 77.4 bits (189), Expect = 3e-18
 Identities = 70/266 (26%), Positives = 124/266 (46%), Gaps = 23/266 (8%)

Query: 496 AFPLAHIERTLEVTAEQIVQIEGRQHFWHEGRHIGLVAASQLLNRPAGQSDEASLRVVVI 555
           A PL  + R  E+   +I ++ G     + G  I ++ A++ + R A  +      ++V 
Sbjct: 639 AVPLGLVTRIEELEVARIERVNGYPVLQYRGALIPVLYANEEVQRVAAGTQP----MLVF 694

Query: 556 REREQLYGVAVERLVGERVLVVMPLDPRLG--KVQDISSGALLDDGSVVLIVDVEDLLRS 613
            +  ++ G+ V+ +V    +V   LD  L    + ++   A+L  G    I+DV   ++ 
Sbjct: 695 ADGGRVMGLVVDEIVD---IVEAELDMELSPSNMPEVLGAAVLS-GQATEILDVAFYVQ- 749

Query: 614 LEKLLSTGSLERIERGSSGARGVVRKRILVVDDSLTVRELQRKLLGNRGYDVAVAVDGMD 673
               ++ G     ER     R   R R+L+VD+S   R+L   +L   GY+V     G +
Sbjct: 750 ----VAFG-----ERFRHLVRSSERPRLLLVDESPFHRDLLAPMLNGNGYEVTACASGGE 800

Query: 674 GWNALRSED-FDLLITDIDMPRMDGIELVTLVRRDQRLQSLPVMVVSYKDREEDRRRGLD 732
               L +ED FD +++D+D+P MDG  L   VR D R++ +P++ ++     +   RG  
Sbjct: 801 ALARLGTEDGFDAIVSDVDLPDMDGFALAAAVRGDPRIREVPIIALATAQDRDALERGRA 860

Query: 733 AGADYYLAKASFHDDALLDAVVELIG 758
            G    +AK  F    L+ A+ E  G
Sbjct: 861 VGFTDCVAK--FDRSGLIAALKEFTG 884