Pairwise Alignments

Query, 762 a.a., Sensor histidine kinase/response regulator from Pseudomonas putida KT2440

Subject, 698 a.a., Signal transduction histidine kinase CheA from Variovorax sp. SCN45

 Score =  222 bits (565), Expect = 6e-62
 Identities = 129/410 (31%), Positives = 228/410 (55%), Gaps = 18/410 (4%)

Query: 226 GMQALDGLRMQLEDTGQGNEVLEALAQTQRLLAETQRILQQQAADLDEFGWQASQR-AQL 284
           G +    +R+ +E   Q   ++  L  TQ +L +   +L   A +    G    +R A+ 
Sbjct: 289 GTKESSSIRVDVEKVDQLINLVGELVITQSMLTQAATMLDPVAYERFLSGLGHLERNARD 348

Query: 285 LYDTALACRMRPFADVLTGQSRMVRDLGRSLGKPVRLVVEGEKTQVDRDVLEKLEAPLTH 344
           L ++ ++ RM P   V +   R++RD+   LGK VRL   G++T++D+ ++E++  PLTH
Sbjct: 349 LQESVMSIRMMPMDYVFSRFPRVIRDVSAKLGKQVRLDTYGKETELDKGLIERIVDPLTH 408

Query: 345 LLRNAVDHGIELPERRLLAGKPDEGVIRLRASHQAGMLSLELIDDGAGIDLERLRSSIVE 404
           L+RN++DHGIE P+ RL  GK   G + L A H  G + +E+ DDGAG++ ER+ +  ++
Sbjct: 409 LVRNSLDHGIETPDVRLAKGKDATGQLLLSAQHHGGNIVIEVSDDGAGLNRERILAKALQ 468

Query: 405 RALSPADTVARMSEAELLTFLFLPGFSLRDKVTEVSGRGVGLDAVQHLIRELRGSIELTQ 464
           + L  ++T   M + E+   +F PGFS  ++VT++SGRGVG+D V+  I+E+ G +E+  
Sbjct: 469 QGLPVSET---MPDEEVWQLIFAPGFSTAEQVTDISGRGVGMDVVKRNIQEMGGHVEIHS 525

Query: 465 VAGQGCRFHLQVPLTLSVVRSLVVEVGGEAYAFPLAHIERTLEVTAEQIVQIEGRQHFWH 524
             GQG    + +PLTL+++  + V+VG EAY  PL+++  +L+   E +  I    H   
Sbjct: 526 RGGQGTTTRIVLPLTLAILNGMSVKVGDEAYILPLSYVIESLQPLPEHLHSITADGHVIR 585

Query: 525 -EGRHIGLVAASQLLNRPAGQSDEASLRVVVIREREQLYGVAVERLVGERVLVVMPLDPR 583
             G ++ L+   ++ +    Q+      +V+++  +  + + V+ L+G+  +VV  L+  
Sbjct: 586 VRGEYLPLIELHRVFDVAGAQTHPTQGILVIVQADDSRFALLVDELLGQHQVVVKNLETN 645

Query: 584 LGKVQDISSGALLDDGSVVLIVDVEDLLRSLEKLLSTGSLERIERGSSGA 633
             KV  IS+  +L DGSV  I+DV             G++ RI+R  + +
Sbjct: 646 YRKVPGISAATILGDGSVAFIIDV-------------GAMPRIQRAQAAS 682



 Score = 69.7 bits (169), Expect = 5e-16
 Identities = 62/193 (32%), Positives = 86/193 (44%), Gaps = 14/193 (7%)

Query: 1   MTPEQMRDASLLELFSLEAEAQTQVLNAGLMALERNPTQADQLEACMRAAHSLKGAARIV 60
           M   Q   A  +E   L AE +  +L+     L+     ++QL A  RAAHS+KG A   
Sbjct: 1   MDLSQFTQAFFVEAIELLAEMEQLLLD-----LDVEAPDSEQLNAIFRAAHSIKGGAATF 55

Query: 61  GVDAGVSVAHVMEDCLVAAQEGRLRLTAEHIDALLQGTDLLMRIATPGDAGAQATLPVFL 120
           G  A  +  HV+E  L  A+ G+L L    IDA L+  D L    T   AG Q   P  +
Sbjct: 56  GFTALTNTTHVLETLLDRARHGQLSLNGRMIDAFLETKDALQEQLTAYQAG-QEPNPDMV 114

Query: 121 AQMASLLDPGASAMPVVPPAASVPPLATLPPAPMVMPAEPPEPEPEPALRRKAGKRAGEG 180
           A +  +L     A+     + +    AT   AP+  PA  P     PA   +A   AG+G
Sbjct: 115 AHICGVLQ--QLALESGDESLAAHAAATAAAAPVAAPAPAPVAAAAPA---EAAVPAGDG 169

Query: 181 AERVLRVTADRLN 193
              VLR+   RL+
Sbjct: 170 ---VLRIRFARLS 179