Pairwise Alignments
Query, 762 a.a., Sensor histidine kinase/response regulator from Pseudomonas putida KT2440
Subject, 2069 a.a., Signal transduction histidine kinase CheA from Variovorax sp. SCN45
Score = 246 bits (629), Expect = 7e-69
Identities = 220/804 (27%), Positives = 352/804 (43%), Gaps = 69/804 (8%)
Query: 8 DASLLELFSLEAEAQTQVLNAGLMALERNPTQADQLEACMRAAHSLKGAARIVGVDAGVS 67
D L +F EA L L +P + A +R H+LKG+AR+ G
Sbjct: 1256 DVDLFPIFEEEAAELLPQLGESLRQWAHHPDDSAPRAAVLRTLHTLKGSARLAGAMRLGE 1315
Query: 68 VAHVMEDCL-VAAQEGRLRLTAEHIDALLQGTDLLMRIATPGDAGAQATLPVFLAQMASL 126
AH ME + + +G R E + L D Q L +A AS
Sbjct: 1316 RAHRMESEIELLGSQGAERADIEKLLGRLDALQATFDALRAADDATQVELAQLVAS-ASA 1374
Query: 127 LDPGASAMPVVPPAA------SVPPLA------TLPPAPMVMPAEPPEPEPEPALRRKAG 174
P A + V P A S P+A T PA +P PA A
Sbjct: 1375 SAPAAQLVQVAPEAGVPANDESAAPVAGDEDGETADDIAAAAPATASALQPRPAPALLAP 1434
Query: 175 KRAGEGAERVLRVTADRLNSLLDLSSKSLVETQRLKPYLATL---------------QRL 219
RA + + +R+ L+ L+ + + ++ RL+ L L Q+L
Sbjct: 1435 LRAV--SSQAVRIRTQLLDRLVAQTGEVIITRSRLEAELGQLRGSLADLTGNLDRLRQQL 1492
Query: 220 KRMHGQGMQALDGLRMQLEDTGQGNEVLE-----ALAQTQRLLAET-------QRILQQQ 267
+ + Q + Q +D+ Q + LE + + R++AE+ QR LQ+
Sbjct: 1493 RDIEVQAESQMQSRLAQAKDSQQSFDPLEFDRFTRVQELTRMMAESVNDVATVQRTLQKT 1552
Query: 268 A-ADLDEFGWQASQRAQLLYDTALACRMRPFADVLTGQSRMVRDLGRSLGKPVRLVVEGE 326
A D+ QA Q +L L RM F + R+VR + GK VRL + G
Sbjct: 1553 VQATEDDLSVQARQTRELQRGL-LRTRMVEFEGISDRLYRVVRQASKDTGKQVRLDIVGG 1611
Query: 327 KTQVDRDVLEKLEAPLTHLLRNAVDHGIELPERRLLAGKPDEGVIRLRASHQAGMLSLEL 386
++DR VL+++ HLLRN V HGIE R AGK G+I + H+ +S+
Sbjct: 1612 SIEMDRGVLDRMTPAFEHLLRNCVAHGIEDAAAREKAGKDASGLIVIDLHHEGNDVSVSF 1671
Query: 387 IDDGAGIDLERLRSSIVERALSPADTVARMSEAELLTFLFLPGFSLRDKVTEVSGRGVGL 446
DDGAG+D +R+ L AD +S E +F PGFS +V+E++GRG+G+
Sbjct: 1672 RDDGAGLDRKRIAERARVLGLIGADQ--ELSAEEATELIFKPGFSTAGQVSELAGRGIGM 1729
Query: 447 DAVQHLIRELRGSIELTQVAGQGCRFHLQVPLTLSVVRSLVVEVGGEAYAFPLAHIERTL 506
D V+ I L G IE GQG F L +PLT +V +++ G + P +E
Sbjct: 1730 DVVRAQIAALGGRIETHSTPGQGTTFKLVLPLTTAVTHVVMLRAGEVSIGVPSNLVELVQ 1789
Query: 507 EVTAEQIVQIEGRQHFWHEGRHIGLVAASQLLNRPAGQSDEASLR---VVVIREREQLYG 563
V+ + + A LL + + +S+ A+ + +VV+R Q
Sbjct: 1790 RVSGTDLDAAYLHNSHPFGSEQVPFYWAGALL-QASTRSEHAAAKNNTLVVVRSAAQRVA 1848
Query: 564 VAVERLVGERVLVVMPLDPRLGKVQDISSGALLDDGSVVLIVDV------------EDLL 611
+ V+ ++G + +VV L P+L ++ ++ ++L G+V LI + E
Sbjct: 1849 LHVDEVLGNQEVVVKNLGPQLARLPGLAGISVLASGAVALIYNPVALAAVHGEQARERQA 1908
Query: 612 RSLEKLLSTGSLERIERGSSGARGVVRK------RILVVDDSLTVRELQRKLLGNRGYDV 665
+L + + E+G V+ +LVVDDS+TVR + ++LL GY V
Sbjct: 1909 AALAAAPARAAAAEAEQGVPQEPVVLAPVTPQIPLVLVVDDSITVRRVTQRLLQREGYRV 1968
Query: 666 AVAVDGMDGWNALRSEDFDLLITDIDMPRMDGIELVTLVRRDQRLQSLPVMVVSYKDREE 725
++A DG+ L+ E ++++DI+MPRMDG +L +R D L LP+++++ + E+
Sbjct: 1969 SLAADGLQALERLQQERPAVVLSDIEMPRMDGFDLARNIRADSALAELPIIMITSRIAEK 2028
Query: 726 DRRRGLDAGADYYLAKASFHDDAL 749
R G ++YL K ++ L
Sbjct: 2029 HRDYARTLGVNHYLGKPYSEEELL 2052
Score = 52.4 bits (124), Expect = 2e-10
Identities = 55/200 (27%), Positives = 83/200 (41%), Gaps = 35/200 (17%)
Query: 5 QMRDASLLELFSLEAEAQTQVLNAGLMALERNPTQADQLEACMRAAHSLKGAARIVGV-- 62
++ + L +F EA Q + L P ++L RA H+LKG++R+VG+
Sbjct: 660 ELEEDDLQNIFLDEAREVVQNGLEAIAELASYPDDTEELTILRRAFHTLKGSSRMVGLTE 719
Query: 63 --DAGVSVAHVMEDC----------LVAAQEGRLRLTAEHIDALLQG------TDLLMRI 104
DA S+ V+ L++ E LR +E ++A+ G R+
Sbjct: 720 FGDAAWSLEQVLNTWLADQRAATPELLSGTERTLREFSEWVEAIAAGQPHSWQAASFSRV 779
Query: 105 ATPGDAGAQATLPVFLAQMASLLDPG---ASAMPVVPPAASVPPLATLPPAP-MVMPAEP 160
A AG PV +A +L A+ PV PA + P+ LP P + + EP
Sbjct: 780 ANALLAGEPVPPPVRVADAEALAVAARHIAAETPVAAPAVAPLPMPALPDLPDLSLTPEP 839
Query: 161 -----------PEPEPEPAL 169
PEP PEPAL
Sbjct: 840 VSHVEPVAHVAPEPVPEPAL 859