Pairwise Alignments

Query, 762 a.a., Sensor histidine kinase/response regulator from Pseudomonas putida KT2440

Subject, 2142 a.a., PAS domain S-box protein from Magnetospirillum magneticum AMB-1

 Score =  117 bits (293), Expect = 6e-30
 Identities = 81/248 (32%), Positives = 121/248 (48%), Gaps = 10/248 (4%)

Query: 239  DTGQGNEVL--EALAQTQRLLAETQRILQQQAADLDEFGWQASQRA-----QLLYDTALA 291
            D  Q  E++  + L + +R+    ++++Q +    D    +A   A     +LL +    
Sbjct: 1889 DLSQLREIIGDDFLDRGERITLTAEQVVQLERLASDLLRGEAIDTAVPEIRRLLVEIGFL 1948

Query: 292  CRMRPFADVLTGQSRMVRDLGRSLGKPVRLVV--EGEKTQVDRDVLEKLEAPLTHLLRNA 349
             R  P  D L+G    V  +   L K V  V    GE   +D          L H+ RNA
Sbjct: 1949 -RKTPLCDTLSGHRNTVAQVAARLEKNVAPVEISGGEDIWIDPKTFAPFLRSLAHVFRNA 2007

Query: 350  VDHGIELPERRLLAGKPDEGVIRLRASHQAGMLSLELIDDGAGIDLERLRSSIVERALSP 409
            V HGIE P+ RLLAGK + G I  +    A  + L + DDG GID   +R+ +VE  L P
Sbjct: 2008 VTHGIEDPDSRLLAGKNESGRITCKVGRTADSIHLSIADDGVGIDQGAVRTRVVEAGLMP 2067

Query: 410  ADTVARMSEAELLTFLFLPGFSLRDKVTEVSGRGVGLDAVQHLIRELRGSIELTQVAGQG 469
            A+ VA M+EA++L  +FL   +    + + SGRGVGL AV+    +L G++ +    GQG
Sbjct: 2068 AEAVAAMTEAQVLDLIFLDSMTTNVHLDQFSGRGVGLAAVRAETAKLGGTVAVRTRPGQG 2127

Query: 470  CRFHLQVP 477
              F   +P
Sbjct: 2128 TEFVFTLP 2135