Pairwise Alignments

Query, 762 a.a., Sensor histidine kinase/response regulator from Pseudomonas putida KT2440

Subject, 886 a.a., ATPase from Magnetospirillum magneticum AMB-1

 Score =  250 bits (638), Expect = 3e-70
 Identities = 179/612 (29%), Positives = 291/612 (47%), Gaps = 49/612 (8%)

Query: 11  LLELFSLEAEAQTQVLNAGLMALERNPTQADQLEACMRAAHSLKGAARIVGVDAGVSVAH 70
           LL  F  E      VL+  L+ LE+NP     L    R  H++KG    +G+     VAH
Sbjct: 4   LLSEFLTETSESLSVLDIALVNLEQNPNDPQILGNIFRLVHTIKGTCGFLGLPRLEHVAH 63

Query: 71  VMEDCLVAAQEGRLRLTAEHIDALLQGTD---LLMRIATPGDAGAQATLPVFLAQMASLL 127
             E+ L   ++G L +T + +  +LQ  D   L++      +   + +    + ++ ++ 
Sbjct: 64  AGENVLGKFRDGELEVTPDAVTLILQSIDRIKLILGHLEQNECEPEGSDEDLIERLNAMA 123

Query: 128 DPGASAMPVVPPAASVP-----PLATLP-PAPMVMPAEP-PEPEPEP---ALRRKAGKRA 177
           +  A   P  PP  S P     P+A  P P P+    EP PEPEPEP   ++     + +
Sbjct: 124 EGRAIGAPSAPPPPSPPMPVFEPVAAAPAPEPVAAAPEPEPEPEPEPVKASVPATTPQPS 183

Query: 178 GEGAERVLRVTADRLNSLLDLSSKSLVETQRLKPYLATLQRLKRMHGQGMQALDGLRMQL 237
              A     V A         + +S V  Q ++  +  L+ L  +    +  L   R QL
Sbjct: 184 PPAAAAAPPVPAGE-------AKESAVAAQTIRVNVELLENLMTL----VSELVLTRNQL 232

Query: 238 EDTGQGNEVLEALAQTQRLLAETQRILQQQAADLDEFGWQASQRAQLLYDTALACRMRPF 297
               +G +  E     QRL   T         DL E                +  RM+P 
Sbjct: 233 LQMVRGKDDSEFATPLQRLSHIT--------TDLQE--------------GVMKTRMQPI 270

Query: 298 ADVLTGQSRMVRDLGRSLGKPVRLVVEGEKTQVDRDVLEKLEAPLTHLLRNAVDHGIELP 357
            +      R+VRDL   + K + L + G +T++DR VLE ++ PLTH++RN+ DHG+E  
Sbjct: 271 GNAWAKLPRIVRDLAVEMNKKIDLQMLGAETELDRQVLELIKDPLTHMVRNSADHGLEGT 330

Query: 358 ERRLLAGKPDEGVIRLRASHQAGMLSLELIDDGAGIDLERLRSSIVERALSPADTVARMS 417
           E R   GKP+ G I L A H+ G + +E+ DDG G++L+R++   ++  L+    +  ++
Sbjct: 331 EERKRVGKPEIGKIVLNAFHEGGHIIIEISDDGRGLNLDRIKQKAIQNGLATESELEALT 390

Query: 418 EAELLTFLFLPGFSLRDKVTEVSGRGVGLDAVQHLIRELRGSIELTQVAGQGCRFHLQVP 477
             ++  F+F  GFS  +KVT VSGRGVG+D V+  I ++ G++EL    G+G  F +++P
Sbjct: 391 PQQIYQFIFKAGFSTAEKVTSVSGRGVGMDVVRTNIEKIGGTVELKSQPGKGSSFIIKIP 450

Query: 478 LTLSVVRSLVVEVGGEAYAFPLAHIERTLEVTAEQ---IVQIEGRQHFWHEGRHIGLVAA 534
           LTL++V +L+VE   E +A P   +   + VTA     I  I          R + LV+ 
Sbjct: 451 LTLAIVSALIVECAVERFAIPQISVLELVRVTANSEHGIEMINNAPVLRLRDRLLPLVSL 510

Query: 535 SQLLNRPAGQSDEASLRVVVIREREQLYGVAVERLVGERVLVVMPLDPRLGKVQDISSGA 594
            +LL       ++    +VV +     +G+ V+R+     +VV P+ P L  +   S   
Sbjct: 511 KRLLKLAENDEEQQETFIVVTQVGTYTFGIIVDRVFDTEEIVVKPVAPILRHISMFSGNT 570

Query: 595 LLDDGSVVLIVD 606
           +L DGSV++I+D
Sbjct: 571 ILGDGSVIMILD 582



 Score = 92.8 bits (229), Expect = 7e-23
 Identities = 83/280 (29%), Positives = 125/280 (44%), Gaps = 18/280 (6%)

Query: 486 LVVEVGGEAY-AFPLAHIERTLEVTAEQIVQIEGRQHFWHEGRHIGLVAASQLLNRPAGQ 544
           LV   GG+   A PLA + R  E+   +I    G+    + G  + L+A   ++N     
Sbjct: 620 LVFRAGGDDLKAVPLALVARLEEIEVGEIEHSHGKPMVQYRGHLMPLIAIDGIMNF---- 675

Query: 545 SDEASLRVVVIREREQLYGVAVERLVGERVLVVMPLDPRLGKVQDISSGALLDDGSVVLI 604
            DE    V+V  +++   G+ V+ +V    +V   L   L        G  +  G    I
Sbjct: 676 RDEGRQPVLVFSDKDHTMGLVVDEIVD---IVEDRLKVELSADNPGVIGTAVIAGKATTI 732

Query: 605 VDVEDLLRSLEKLLSTGSLERIERGSSGARGVVRKRILVVDDSLTVRELQRKLLGNRGYD 664
           +D    L       + G          G       R+L+VDDS   R L   LL   GY+
Sbjct: 733 IDAGYYLPQ-----AFGDWFGRNDKEFGNADFHAPRVLLVDDSPFFRNLLTPLLSVAGYE 787

Query: 665 VAVAVDGMDGWNALRS--EDFDLLITDIDMPRMDGIELVTLVRRDQRLQSLPVMVVSYKD 722
           V ++VDG D    LR   ++FD +I+DI+MP M G E    VR D R  ++P++ +S   
Sbjct: 788 V-ISVDGADKALQLRERGDEFDAIISDIEMPGMSGFEFAAAVRADGRWGTIPMVALSSHA 846

Query: 723 REEDRRRGLDAGADYYLAKASFHDDALLDAVVELIGVAQG 762
            E+D  RG   G + Y+AK  F  DALL  +   I  ++G
Sbjct: 847 TEKDFERGRQVGFNDYIAK--FDRDALLQTLASTIAASKG 884