Pairwise Alignments

Query, 303 a.a., polyamine ABC transporter, permease protein from Pseudomonas putida KT2440

Subject, 291 a.a., Spermidine/putrescine transport system permease protein PotB from Xanthobacter sp. DMC5

 Score =  117 bits (292), Expect = 4e-31
 Identities = 81/291 (27%), Positives = 145/291 (49%), Gaps = 39/291 (13%)

Query: 20  ALLLIPPLTWFGAI-YLGSLLNLLWQGF------------YTFDDFTMAVTPDLTLGNFA 66
           A  L+ P+    AI +L  ++NLL   F            Y  D +T A+T   TL    
Sbjct: 20  ASALLLPIAVVNAIGFLWPVVNLLKMSFREAQASGALGAGYNLDTWTNALTDSFTL---- 75

Query: 67  ALFNPSNFDIILRTLGMAVAVSLASAVLAFPIAYYMARYTSGKTKAFFYIAVMMPMWASY 126
                   ++I  ++G+++ +++ + + ++PIA Y+ R T G  +    + V+ P+  S 
Sbjct: 76  --------ELITNSVGVSLLITVLTLIASYPIALYLHRST-GTWRTMLMVLVVAPLLTSA 126

Query: 127 IVKTYAWTLLLAKGGVAQWFVQQLHLDGLLQAVLAVPGVGGSTLSTSHLGRFLVFVYIWL 186
           +V+TY W  +L+  G+            +  A++A+       L  +  G  +    I +
Sbjct: 127 VVRTYGWIAILSDRGL------------VANALMALGMAEPPRLMFNLTGVVIGLTEILM 174

Query: 187 PFMILPIQASLERLPPSLLQASADLGARPGQTFVQVILPLSIPGIAAGSIFTFSLTLGDF 246
           P+MIL + +   RL P L +A+  LGA P +TF +V+LPL+ PG+A G +  F L +  F
Sbjct: 175 PYMILALLSGFGRLDPRLEEAALTLGASPLKTFWRVVLPLTAPGMALGGLLCFVLAISSF 234

Query: 247 IVPQLVGPPGYF-IGSMVYAQQGAIGNMPMAAAFTLVPIVLIAVYLAIVKR 296
           + P+L+G    F + + +Y Q     N P+AAA +++ +V+  + LA+  R
Sbjct: 235 VTPKLLGGGRVFLLATEIYDQAIVTLNWPLAAALSMIVLVVFGISLALYAR 285