Pairwise Alignments

Query, 303 a.a., polyamine ABC transporter, permease protein from Pseudomonas putida KT2440

Subject, 290 a.a., hypothetical protein from Xanthobacter sp. DMC5

 Score =  138 bits (348), Expect = 1e-37
 Identities = 93/293 (31%), Positives = 154/293 (52%), Gaps = 23/293 (7%)

Query: 1   MSTLRTLSNLLYRRPNLYLALLLIPP-LTWFGAIYLGSLLNLLWQGFYTFDDFTMAVTPD 59
           MS   +  +++++R    L LLL+ P L   G + +  L  L+WQ       FT+A    
Sbjct: 1   MSASSSDPSVVHKRQEQRLVLLLLAPSLAVVGCLLIVPLCWLVWQSVRQDGAFTLA---- 56

Query: 60  LTLGNFAALFNPSNF-DIILRTLGMAVAVSLASAVLAFPIAYYMARYTSGKTKAFFYIAV 118
               ++A  F+ + +    L+T  +A  V+  + +L +PIAY +A   S +   F    V
Sbjct: 57  ----HYARFFSDAVYWTTFLQTFRIAFIVTAVTVLLGYPIAY-VAAGASRRWSIFILAMV 111

Query: 119 MMPMWASYIVKTYAWTLLLAKGGVAQWFVQQLHLDGLLQAVLAVPGVGGSTLSTSHLGRF 178
           ++P W S +V+ YAW +LL + G+    +      GL+Q  LA        L  + LG  
Sbjct: 112 ILPFWTSVLVRAYAWLILLQRRGLVNSVLTDF---GLIQNPLA--------LVNNELGTV 160

Query: 179 LVFVYIWLPFMILPIQASLERLPPSLLQASADLGARPGQTFVQVILPLSIPGIAAGSIFT 238
           +  V+I LPFM+LP+ A+++++P  L  A A LG  P   F +V LPLS+PG+ AG +  
Sbjct: 161 IATVHILLPFMVLPLYATMQKIPAELTMAGASLGGTPFYVFTRVFLPLSLPGVVAGMVLV 220

Query: 239 FSLTLGDFIVPQLVGPPGYFIGSMVYAQQGAIGNMPMAAAFTLVPIVLIAVYL 291
           F LTLG +I P+L+G    ++ SM+ ++   + N    AA ++  ++L  V+L
Sbjct: 221 FVLTLGFYITPELLGGGRTYMVSMLVSRNIEVYN-EWGAASSISIVLLACVFL 272