Pairwise Alignments

Query, 303 a.a., polyamine ABC transporter, permease protein from Pseudomonas putida KT2440

Subject, 306 a.a., spermidine/putrescine ABC transporter permease from Pseudomonas simiae WCS417

 Score =  113 bits (282), Expect = 6e-30
 Identities = 72/252 (28%), Positives = 137/252 (54%), Gaps = 16/252 (6%)

Query: 47  YTFDDFTMAVTPDLTLGNFAALFNPSNF-DIILRTLGMAVAVSLASAVLAFPIAYYMARY 105
           YTF +  + +   L LGN+A L +   +    L +L MA   +L   ++ +P+AY +A  
Sbjct: 59  YTFVEQKLQLV--LNLGNYAMLGDDELYIAAYLGSLKMAFFSTLLCLLIGYPMAYAIASA 116

Query: 106 TSGKTKAFFYIAVMMPMWASYIVKTYAWTLLLAKGGVAQWFVQQLHLDGLLQAVLAVPGV 165
              + +    + +MMP W + +++ YAW  +L+  G+   F+  +   GL+   L +   
Sbjct: 117 RK-EMQTVLVLLIMMPTWTAILIRVYAWMGILSNNGLLNGFLMSM---GLINEPLQI--- 169

Query: 166 GGSTLSTSHLGRFLVFVYIWLPFMILPIQASLERLPPSLLQASADLGARPGQTFVQVILP 225
                  +++  ++  VY +LPFMILP+ A+L +   SLL+A++DLG+    +F ++ +P
Sbjct: 170 -----LNTNIAVYIGVVYSYLPFMILPLYANLVKHDQSLLEAASDLGSSTFNSFWKITVP 224

Query: 226 LSIPGIAAGSIFTFSLTLGDFIVPQLV-GPPGYFIGSMVYAQQGAIGNMPMAAAFTLVPI 284
           LS  GI AG +  F   +G+F++P+L+ GP    IG +++ +     + P+A+A  +V +
Sbjct: 225 LSKNGIIAGCMLVFIPVVGEFVIPELLGGPETLMIGKVLWQEFFNNRDWPVASALAVVML 284

Query: 285 VLIAVYLAIVKR 296
            ++ V + +  R
Sbjct: 285 AILIVPIILFNR 296