Pairwise Alignments

Query, 303 a.a., polyamine ABC transporter, permease protein from Pseudomonas putida KT2440

Subject, 303 a.a., Putrescine transport system permease protein PotH (TC 3.A.1.11.2) from Hydrogenophaga sp. GW460-11-11-14-LB1

 Score =  120 bits (301), Expect = 4e-32
 Identities = 71/229 (31%), Positives = 121/229 (52%), Gaps = 13/229 (5%)

Query: 66  AALFNPSNFDIILRTLGMAVAVSLASAVLAFPIAYYMARYTSGKTKAFFYIAVMMPMWAS 125
           A LF     D  LR++  A+  ++    + +P AY++AR  +    A   + VM+P W S
Sbjct: 75  APLFRTLYIDAYLRSIWYALCTAVLCLAIGYPFAYFIARSPASIRPALL-LMVMLPFWTS 133

Query: 126 YIVKTYAWTLLLAKGGVAQWFVQQLHLDGLLQAVLAVPGVGGSTLSTSHLGRFLVFVYIW 185
           ++++ YAW  +LA  GV    +  +   GL+   +         +  +++   +   Y++
Sbjct: 134 FLLRVYAWKGILADQGVLNRLLMSI---GLISEPIP--------MLYTNVSMLIGMTYVY 182

Query: 186 LPFMILPIQASLERLPPSLLQASADLGARPGQTFVQVILPLSIPGIAAGSIFTFSLTLGD 245
           LPFMILP+ A+L ++   LL+A+ DLG  P + F  + +PLS  GI AG +  F   +G+
Sbjct: 183 LPFMILPLYANLVKMDFRLLEAAYDLGTSPFKAFWLITVPLSKAGIIAGFMLVFIPCVGE 242

Query: 246 FIVPQLV-GPPGYFIGSMVYAQQGAIGNMPMAAAFTLVPIVLIAVYLAI 293
           F++P L+ GP    IG +V+ +     + P A A  +V I LI + LA+
Sbjct: 243 FVIPSLLGGPENLMIGRVVWDEMFTANDWPRATALAVVMIALIVIPLAL 291