Pairwise Alignments

Query, 303 a.a., polyamine ABC transporter, permease protein from Pseudomonas putida KT2440

Subject, 317 a.a., putrescine transporter subunit: membrane component of ABC superfamily (NCBI) from Escherichia coli BW25113

 Score =  133 bits (334), Expect = 6e-36
 Identities = 86/284 (30%), Positives = 157/284 (55%), Gaps = 18/284 (6%)

Query: 10  LLYRRPNLYLALLLIPPLTWFGAIYLGSLLNLL--WQGFYTFDDFTMAVTPDLTLGNFAA 67
           L+   P ++L LL + P      I L  +   +  +     + D  +++T  L LGNF  
Sbjct: 31  LVIALPYIWLILLFLLPFLIVFKISLAEMARAIPPYTELMEWADGQLSIT--LNLGNFLQ 88

Query: 68  LFN-PSNFDIILRTLGMAVAVSLASAVLAFPIAYYMARYTSGKTKAFFYIAVMMPMWASY 126
           L + P  FD  L++L +A   +    ++ +P+A+ +A ++   T+    + V++P W S+
Sbjct: 89  LTDDPLYFDAYLQSLQVAAISTFCCLLIGYPLAWAVA-HSKPSTRNILLLLVILPSWTSF 147

Query: 127 IVKTYAWTLLLAKGGVAQWFVQQLHLDGLLQAVLAVPGVGGSTLSTSHLGRFLVFVYIWL 186
           +++ YAW  +L   GV   F+  L   G++   L        T+  ++L  ++  VY ++
Sbjct: 148 LIRVYAWMGILKNNGVLNNFLLWL---GVIDQPL--------TILHTNLAVYIGIVYAYV 196

Query: 187 PFMILPIQASLERLPPSLLQASADLGARPGQTFVQVILPLSIPGIAAGSIFTFSLTLGDF 246
           PFM+LPI  +L R+  SL++A+ DLGARP +TF  VI+PL+  GI AGS+  F   +G+F
Sbjct: 197 PFMVLPIYTALIRIDYSLVEAALDLGARPLKTFFTVIVPLTKGGIIAGSMLVFIPAVGEF 256

Query: 247 IVPQLV-GPPGYFIGSMVYAQQGAIGNMPMAAAFTLVPIVLIAV 289
           ++P+L+ GP    IG +++ +     + P+A+A  ++ ++L+ V
Sbjct: 257 VIPELLGGPDSIMIGRVLWQEFFNNRDWPVASAVAIIMLLLLIV 300