Pairwise Alignments

Query, 268 a.a., polyamine ABC transporter, permease protein from Pseudomonas putida KT2440

Subject, 267 a.a., Inner membrane ABC transporter permease protein YdcV from Xanthobacter sp. DMC5

 Score =  119 bits (299), Expect = 5e-32
 Identities = 73/241 (30%), Positives = 120/241 (49%), Gaps = 7/241 (2%)

Query: 18  LLFLHFPILIIFLYAFNTEDAAFSFPPKGFTLKWIDVAFTRPDVLEAIKLSLQVACLATL 77
           ++ L  P L+I + +F  E+A   FPP  ++L+W        ++  A+ +SL+VA ++  
Sbjct: 22  VIVLAGPTLVILILSFTGEEA-LHFPPASYSLRWYAALIDANELQAALWVSLKVAVISVS 80

Query: 78  IALVLGTLASAALYRRSFFGKESISLVLILPIALPGIITGIALLSAFKTLGIEPGVFTIV 137
             +VLG  A+  + R        +  + + P+ LP +  G A L  F  LG+ P   T+ 
Sbjct: 81  ACVVLGVAAALGIARSEGAVARGLETLFLSPLILPALAFGFAALMLFSILGMRPSTLTLA 140

Query: 138 VGHATFCVVIVYNNVIARLRRTSQSLIEASMDLGADGWQTFRYIVLPNLGSALLAGGMLA 197
           +GH   CV  V    +A L +   +L++AS  LGA    TFR + LP +   + +G  +A
Sbjct: 141 IGHIVVCVPFVLRTTLASLAQLDPALLDASRSLGASRLHTFRTVTLPLISPGVASGAFIA 200

Query: 198 FALSFDEIIVTTFTA-GHERTLPIWL----LNQL-SRPRDVPVTNVVAMLVMLVTMLPIL 251
           F  SFD + V+ F      + LPI+L     NQL SR        ++A ++M+V M  + 
Sbjct: 201 FMASFDNVPVSLFLQDARTQVLPIYLWDIIQNQLDSRAASACGVIIIATVLMMVLMERVA 260

Query: 252 G 252
           G
Sbjct: 261 G 261