Pairwise Alignments

Query, 268 a.a., polyamine ABC transporter, permease protein from Pseudomonas putida KT2440

Subject, 271 a.a., Inner membrane ABC transporter permease protein YdcV from Xanthobacter sp. DMC5

 Score =  133 bits (335), Expect = 3e-36
 Identities = 78/244 (31%), Positives = 142/244 (58%), Gaps = 4/244 (1%)

Query: 17  GLLFLHFPILIIFLYAFNTEDAAFSFPPKGFTLKWIDVAFTRPDVLEAIKLSLQVACLAT 76
           G  FL+ PI+++ +Y+FN       +   GF+ +W         +++A  ++L++A  ++
Sbjct: 16  GFAFLYIPIILLVIYSFNASRLVTVWA--GFSTQWYWSLLENEQLIDAAWVTLRIAFFSS 73

Query: 77  LIALVLGTLASAALYRRSFFGKESI-SLVLILPIALPGIITGIALLSAFKTLGIEPGVFT 135
           L+A VLGT+A+ AL R   FG  ++ S ++  P+ +P +ITG++LL  F  +  + G +T
Sbjct: 74  LVATVLGTMAALALTRYGRFGGRTLFSGMIYAPLVMPEVITGLSLLLLFVAVNFDRGFWT 133

Query: 136 IVVGHATFCVVIVYNNVIARLRRTSQSLIEASMDLGADGWQTFRYIVLPNLGSALLAGGM 195
           +++ H TF +  V   V +RL    ++L EA++DLG   +QTF  I LP +  A+++G M
Sbjct: 134 VLLAHITFTMCFVAVVVQSRLVTFDRTLEEAALDLGCPPFQTFFKITLPLILPAVVSGFM 193

Query: 196 LAFALSFDEIIVTTFTAG-HERTLPIWLLNQLSRPRDVPVTNVVAMLVMLVTMLPILGAY 254
           LAF LS D++++ +FT G    TLP+ + +Q+       +  V  +L+ +VT++ I+ + 
Sbjct: 194 LAFTLSLDDLVIASFTTGPGATTLPMRIYSQVRLGVTPEINAVCTILIAIVTVVVIVASI 253

Query: 255 YLTR 258
              R
Sbjct: 254 VTKR 257