Pairwise Alignments

Query, 178 a.a., Ribosome maturation factor RimM from Pseudomonas putida KT2440

Subject, 184 a.a., 16S rRNA processing protein RimM from Variovorax sp. SCN45

 Score = 87.0 bits (214), Expect = 2e-22
 Identities = 54/175 (30%), Positives = 84/175 (48%), Gaps = 9/175 (5%)

Query: 10  DLIVVGKIFSVHGVRGEVKVYSFTDPIENLLDYPRWTLRHEGKVK----QVELVSGRGSQ 65
           D I VG+I    G++G  KV   +   E L    RW L+  G       ++ +   +   
Sbjct: 13  DAIEVGRIADAWGIKGWFKVLPHSAQPEALFSSKRWFLQAPGASASTAFRLAIREAKEHS 72

Query: 66  KGLVVKLKGLDDRDEARLLSGYEICIPRSLLPNLAADEYYWYQLVGLKVINQDEQLFGKV 125
             +V   + + DR+ A  L G  + +PRS  P    DEYYW  L+GL V+N++  + G V
Sbjct: 73  DCIVATSEDVPDRNAAEALRGARVFVPRSSFPTAGDDEYYWVDLIGLSVVNREGVVLGTV 132

Query: 126 DHLLETGANDVMVVKPCAGSLDDR--ERLLPYTEQCVLAIDLEAGVMRVEWDADF 178
             LL TG    +V+   A   D +  ER++P+    V  +DL   ++ V+W  DF
Sbjct: 133 RELLATGPQTTLVL---AAEEDGKAVERMVPFVSVFVDKVDLPGRLITVDWQPDF 184