Pairwise Alignments

Query, 444 a.a., carbohydrate-selective porin from Pseudomonas putida KT2440

Subject, 493 a.a., Porin B from Xanthobacter sp. DMC5

 Score =  117 bits (292), Expect = 1e-30
 Identities = 111/439 (25%), Positives = 178/439 (40%), Gaps = 48/439 (10%)

Query: 12  LALSALATPAGASEMFASDSPWM--LGDWGGTRSELLEKGYDFTLGYTGEMGSNLHGGYD 69
           +A  A A      E   S +P +  LGDWGG R +L E G    + Y GE+  N  GG  
Sbjct: 51  MATKAPAAAPAEEEAEPSIAPQLGWLGDWGGYRPKLAEAGIKVGVNYIGELWRNTEGGL- 109

Query: 70  HDRTARYSDQFTFGSHLDLEKILGWHDTEFQLTVTERHGDNISNDRINDPRVGGFTSAQE 129
                 Y+ +F F    DL+K+  W    F  +V +  G   S   + +  + G ++   
Sbjct: 110 -GTGTAYNGRFQFSLDADLDKLFNWKGATFHASVLQIQGSGFSGQYLGN--IMGVSNVDA 166

Query: 130 VWGRGETWRLTQMWIKQKYFDGALDVKFGRFGEGEDFNSFPCDFQNLAFCGSQVGNW--- 186
           +     T RL +++I+Q + DG   ++FG+     +   F        F  S  G W   
Sbjct: 167 L----STTRLFELYIEQAFGDGKSSIRFGQLSADSE---FAISDNGSLFLNSTFG-WPAL 218

Query: 187 ------VGGIWYNWPVSQWALRVRYNLTPELYAQVGVFEQNPS----NLESGNGFKLSGS 236
                  GG  Y  P++   +RV++    E    VG+F  NP+    + +  N + L+  
Sbjct: 219 FAADLPSGGPAY--PLATPGVRVKWVPNDEWTVLVGLFNGNPAPCCGDPQEENKYGLNFI 276

Query: 237 GTQGAVMPFELVWT----PRIQGLKGEYRAGYYYSNAKAQDVLKDSNGQPAA--LSGAAY 290
             QG  +  E+ ++         L G  + G +Y++      + D  G P A   S    
Sbjct: 277 VDQGVFVIGEVAYSYNKAENAAWLPGTVKVGGWYNSNSFNSQVYDIFGVPLASPASIGLP 336

Query: 291 RSSSSKHGLWIGAQQQVTSLASDQSRGLSVFANATVHDKKTNAIDNYVQAGLVFKGPFDA 350
                 +  +    Q +      + +G+SVF   T    + N +  Y   G+ FKG    
Sbjct: 337 NQIQGDYAFYAIIDQMIWRKPGTKDKGISVFGRVTAAPSEQNQLGFYWDGGITFKGLVPG 396

Query: 351 RAKDDIGFALARVHVNPAYRKNARLVN--QAAGLYD-YDNPGFLPVQDTEYSAELYYGIH 407
           R  D  G A            NAR+ N  Q A LY    N  + P++ +E   E+ Y   
Sbjct: 397 REDDAFGVAFG----------NARVTNAAQQADLYTALYNGSYYPIRSSETVLEVTYSAQ 446

Query: 408 LADWLTVRPNLQYIRHPGG 426
           +    T++P+ QYI +PGG
Sbjct: 447 VMPGWTIQPDFQYIWNPGG 465