Pairwise Alignments

Query, 444 a.a., carbohydrate-selective porin from Pseudomonas putida KT2440

Subject, 448 a.a., porin from Pseudomonas simiae WCS417

 Score =  548 bits (1412), Expect = e-160
 Identities = 257/432 (59%), Positives = 323/432 (74%), Gaps = 1/432 (0%)

Query: 13  ALSALATPAGASEMFASDSPWMLGDWGGTRSELLEKGYDFTLGYTGEMGSNLHGGYDHDR 72
           A   L+  A A++ F++DS WM GDWGG R++L+E+G D    Y GEMG N  GGY+ D+
Sbjct: 18  AALVLSANAMAADAFSADSKWMTGDWGGERTKLIEQGIDIKADYVGEMGYNAKGGYNDDK 77

Query: 73  TARYSDQFTFGSHLDLEKILGWHDTEFQLTVTERHGDNISNDRINDPRVGGFTSAQEVWG 132
           T RYSDQF  G  LDL+K+ GW +T+ ++ +T R+G NISNDRI DPR G  +S+ EV+G
Sbjct: 78  TGRYSDQFGLGVALDLQKLWGWDNTQAKIQLTNRNGQNISNDRIGDPRAGTLSSSMEVYG 137

Query: 133 RGETWRLTQMWIKQKYFDGALDVKFGRFGEGEDFNSFPCDFQNLAFCGSQVGNWVGGIWY 192
           RG   RLTQ WI+ + FD  LDVK G FGEGEDFN+FPCDFQNL+FCGSQVGN+V   WY
Sbjct: 138 RGHMVRLTQFWIQHQMFDNKLDVKLGYFGEGEDFNTFPCDFQNLSFCGSQVGNYVN-TWY 196

Query: 193 NWPVSQWALRVRYNLTPELYAQVGVFEQNPSNLESGNGFKLSGSGTQGAVMPFELVWTPR 252
           NWPVSQ A+RV+YN+TPELYAQ+G + QNPS LE GNGFKLSGSGT+G V+P ELVW+P+
Sbjct: 197 NWPVSQAAIRVKYNITPELYAQIGAYNQNPSQLEHGNGFKLSGSGTKGTVIPVELVWSPK 256

Query: 253 IQGLKGEYRAGYYYSNAKAQDVLKDSNGQPAALSGAAYRSSSSKHGLWIGAQQQVTSLAS 312
           +  L GEYR GYY S A A DV +D NG  A ++ A +R+ SSK G W  AQQQ+T+   
Sbjct: 257 VNNLPGEYRVGYYKSAADAPDVREDVNGNDAVITRADFRTRSSKKGYWFVAQQQLTTHNG 316

Query: 313 DQSRGLSVFANATVHDKKTNAIDNYVQAGLVFKGPFDARAKDDIGFALARVHVNPAYRKN 372
           D SRGL++ ANAT HDK+TN +DNY    LV+KGPFDAR KDD+G  +AR+HVN   +KN
Sbjct: 317 DASRGLNIAANATFHDKETNLVDNYQSLMLVYKGPFDARPKDDVGIGVARLHVNNDVKKN 376

Query: 373 ARLVNQAAGLYDYDNPGFLPVQDTEYSAELYYGIHLADWLTVRPNLQYIRHPGGVSQVDG 432
           A L+N A G+ DYDN  + P+++TEY+ EL YG H+ +WLTVRPNLQY+  PGGV +VD 
Sbjct: 377 AELLNAANGVSDYDNALYTPIRETEYNVELNYGFHVTNWLTVRPNLQYVVQPGGVDKVDN 436

Query: 433 ALIGGLKIQSSF 444
           AL+ GLKIQS+F
Sbjct: 437 ALVAGLKIQSTF 448