Pairwise Alignments

Query, 444 a.a., carbohydrate-selective porin from Pseudomonas putida KT2440

Subject, 421 a.a., porin from Pseudomonas simiae WCS417

 Score =  197 bits (500), Expect = 7e-55
 Identities = 141/446 (31%), Positives = 205/446 (45%), Gaps = 36/446 (8%)

Query: 7   TCYIGLALSALATPAGASEMFASDSPWMLGDWGGTRSELLEKGYDFTLGYTGEMGSNLHG 66
           T +I L    L    GA+    +D   + GDWGG R EL  +G  FT  Y+GE   N HG
Sbjct: 4   TSHIPLGRLLLGLALGAALPVQADDTTLTGDWGGLRHELDAQGIRFTGEYSGETAYNAHG 63

Query: 67  GYDHDRTARYSDQFTFGSHLDLEKILGWHDTE-FQLTVTERHGDNISNDRINDPRVGGFT 125
           G    R+ARYS     G   DL K+ G+++ +  Q+T+ +R G++ S D      VG   
Sbjct: 64  G--QHRSARYSQNLKLGVQFDLGKLYGFNNGDRIQVTLNDRRGNSASED-----LVGNRL 116

Query: 126 SAQEVWGRGETWRLTQMWIKQKYFDGALDVKFGRFGEGEDFNSFP----CDFQNLAFCGS 181
             QE +G G   RLT++  ++  F  AL+VK G    G D         C+F N  FCG 
Sbjct: 117 PIQENYG-GLYTRLTELSYERTLFTPALNVKLGYMAMGNDLGGLDSGILCNFMNAGFCGH 175

Query: 182 QVGNWVGGIWYNWPVSQWALRVRYNLTPELYAQVGVFEQNP-SNLESGNGFKLSGSGTQG 240
            +    G  W N+P +    RV+Y+  P    +V  F  +P SN  S   + L    T G
Sbjct: 176 PLNMSGGSGWTNYPNAHLGARVKYDFAPNWQLRVAAFNVDPQSNGNSSRAWHLGPKHTTG 235

Query: 241 AVMPFELVWTPRIQGLKGEYRAGYYYSNAKAQDVLKDSNGQPAALSGAAYRSSSSKHGLW 300
            V+P ELV+      L GEY+ GYYY ++  + +              + +  S + G +
Sbjct: 236 TVVPIELVY-KHAGSLPGEYKLGYYYDSSDVKRI-------------GSNKEVSGRGGHY 281

Query: 301 IGAQQQVTSLASDQSRGLSVFANATVHDKKTNAIDNYVQAGLVFKGPFDARAKDDIGFAL 360
           +   Q V +  S   R L  F   +   +  +    +  AG+V   PF+ R +D +    
Sbjct: 282 LLIDQAVWASESSAGRVLHAFGQYSAASEAASPFSKWYGAGVVLYKPFEGRPRDTLALGY 341

Query: 361 ARVHVNPAYRKNARLVNQAAGLYDYDNPGFLPVQDTEYSAELYYGIHLADWLTVRPNLQY 420
            R   NP  R+   L    AG  DY N     + + E   EL YG     WLT+RP++QY
Sbjct: 342 GRAVPNPRSREVQELAALNAG-NDYPN-----LNNAEQLIELSYGYQATPWLTLRPDVQY 395

Query: 421 IRHPGGVS--QVDGALIGGLKIQSSF 444
           I  PG  S   +D AL+ GL+ ++ F
Sbjct: 396 IIEPGAFSGENIDNALVLGLQAKAVF 421