Pairwise Alignments

Query, 444 a.a., carbohydrate-selective porin from Pseudomonas putida KT2440

Subject, 449 a.a., Outer membrane low permeability porin, OprB family from Sphingobium sp. HT1-2

 Score =  167 bits (424), Expect = 5e-46
 Identities = 118/400 (29%), Positives = 181/400 (45%), Gaps = 20/400 (5%)

Query: 30  DSPWMLGDWGGTRSELLEKGYDFTLGYTGEMGSNLHGGYDHDRTARYSDQFTFGSHLDLE 89
           D P +  D       L  +G   +L YTGE  +N+ GG   D T  ++ Q   G+ LDL+
Sbjct: 33  DPPSVQSDAPAPWQPLAAEGVTLSLSYTGEAATNVSGGLRRDAT--HAGQVYVGAELDLD 90

Query: 90  KILGWHDTEFQLTVTERHGDNISNDRINDPRVGGFTSAQEVWGRGETWRLTQMWIKQKYF 149
           +++G         VT RHG N+S   I     G  TS QE++G   T      W +Q + 
Sbjct: 91  RMIGIDGAMLHFAVTNRHGKNLSAMAI-----GNNTSVQEIYGTQNTHLAILTW-QQSFL 144

Query: 150 DGALDVKFGRFGEGEDFNSFP--CDFQNLAFCGSQVGNWVGGIWYNWPVSQWALRVRYNL 207
           DG LD++ GR      F + P  C FQ  + CG+    +    +  +P S W    + ++
Sbjct: 145 DGRLDIEAGRSQANIHFLNSPLYCHFQTNSACGNPTFVFKNSNFTYFPASSWMAHAKLHV 204

Query: 208 TPELYAQVGVFEQNPSNLE-SGNGFKLSGSGTQGAVMPFELVWTPRIQG--LKGEYRAGY 264
           TP++    GV+E +P     S +GF  S     G ++P+EL ++       L G Y  G 
Sbjct: 205 TPQVMLHAGVYEVSPDRKRASDHGFNFSTKNATGVIIPWELSFSRDAADDRLPGHYILGG 264

Query: 265 YYSNAKAQDVLKDSNGQPAALSGAAYRSSSSKHGLWIGAQQQVTSLASDQSRGLSVFANA 324
           ++      D L+D  G  A L+G A  + + + GL+    QQ+T       RG+S+F  A
Sbjct: 265 WFDRGDYADPLRDDQGGIAILTGRAAATRNGRSGLYARFDQQLTRPDPASPRGVSIFGVA 324

Query: 325 TVHDKKTNAIDNYVQAGLVFKGPFDARAKDDIGFALARVHVNPAYRKNARLVNQAAGLYD 384
             +         Y+  G+V  G F  R +D IGFA+     +    +       AAG   
Sbjct: 325 MTNLSGQVEESRYLGMGIVQTGTFAGRDQDTIGFAINDQRFSDLAIQRMNTARVAAG--- 381

Query: 385 YDNPGFLPVQDTEYSAELYYGIHLADWLTVRPNLQYIRHP 424
               G   ++  +Y  EL YG+ +   + + PNLQYI HP
Sbjct: 382 ----GRADIRRHQYMMELAYGLQVNPAIRLSPNLQYILHP 417