Pairwise Alignments

Query, 444 a.a., carbohydrate-selective porin from Pseudomonas putida KT2440

Subject, 538 a.a., hypothetical protein from Sphingobium sp. HT1-2

 Score =  120 bits (302), Expect = 8e-32
 Identities = 104/409 (25%), Positives = 170/409 (41%), Gaps = 19/409 (4%)

Query: 42  RSELLEKGYDFTLGYTGEMGSNLHGGYDHDRTARYSDQFTFGSHLDLEKILGWHDTEFQL 101
           R+ L +KG  F+L Y  E   NL GG +  R A Y  + T   H DL+K++G        
Sbjct: 143 RASLKQKGLTFSLSYKAEAMDNLDGGVE--RGADYVHELTLQMHFDLDKLVGLRGWTLHA 200

Query: 102 TVTERHGDNISNDRINDPRVGGFTSAQEVWGR--GETWRLTQMWIKQKYFDGALDVKFGR 159
            V  R G  +S DR+ +     + +  EV+G   G    L   ++++   DG LDV  GR
Sbjct: 201 LVMNRVGHQVSTDRLGER----YINLMEVYGLTGGVAAHLVDFYLQKTMLDGRLDVAVGR 256

Query: 160 FGEGEDFNSFPCDFQNLAFCGSQVGNWVGGIWYNWPVSQWALRVRYNLTPELYAQVGVFE 219
                 F + P     +  C + V       +  +P +    RVR   T +   Q+GV++
Sbjct: 257 MSLTHVFATSPLLCSFMVTCSAPVILKRAPGFAVYPKATMGGRVRLRPTRDTSVQLGVYQ 316

Query: 220 QNPSNLESGNGFKLSGSGTQGAVMPFELVWTPRI--QGLKGEYRAGYYYSNAKAQDVLKD 277
             P    + +G+      T G ++P E  W P +  + L G Y  GY    ++  D++  
Sbjct: 317 VTPL-ASNPSGWAWGSERTTGVMLPIEFTWQPFLTDKKLPGHYVFGYARDTSRYADLM-- 373

Query: 278 SNGQPAALSGAAYRSSSSKHGLWIGAQQQVTSLA-SDQSRGLSVFANATVHDKKTNAIDN 336
           + G   A+   +   S+  +  W    Q +     SDQ  G  +      +  +  A+ +
Sbjct: 374 TTGAANAIKRDSTPPSAPMNMYWFEGDQMIYRKGGSDQMSGGYLMFGYVHNTPRVAALSD 433

Query: 337 YVQAGLVFKGPFDARAKDDIGFALARVHVNPAYRKNAR-LVNQAAGLYDYDNPGFLPVQD 395
              AG  F G    R  D  G   +  HV+   R N   L++    L        L  Q 
Sbjct: 434 QYYAGFSFNGVVPHRDTDRFGVLWSWYHVSDRLRLNQMYLIDSGQSL----GASVLAPQT 489

Query: 396 TEYSAELYYGIHLADWLTVRPNLQYIRHPGGVSQVDGALIGGLKIQSSF 444
           + +  E YY I +   L ++P   Y+  PG  ++   A + G+KI ++F
Sbjct: 490 SSHVIEAYYSIDVMPGLQLQPEFDYMIRPGETTKTPDATLLGMKIIANF 538