Pairwise Alignments

Query, 444 a.a., carbohydrate-selective porin from Pseudomonas putida KT2440

Subject, 488 a.a., carbohydrate porin from Magnetospirillum magneticum AMB-1

 Score = 54.7 bits (130), Expect = 6e-12
 Identities = 61/238 (25%), Positives = 91/238 (38%), Gaps = 47/238 (19%)

Query: 214 QVGVFEQNPSNLESGNGFKLSGSGTQGAVMPFELVWTPRIQ----GLKGEYRAGYYYSNA 269
           Q GVFE       SG G    GS       PF +V     +    GL+G YR  Y +SN 
Sbjct: 291 QAGVFE-------SGTGASFQGSNE----FPFRIVQAETTERFFGGLEGTYRV-YAWSND 338

Query: 270 KAQDVLKDSNGQPAALSGAAYRSSSSKH-GLWIGAQQQVTSLASDQSRGLSVFANATVHD 328
           +A D                + +   +H GL +   Q+V          +++F       
Sbjct: 339 RATD----------------FDNKRGRHAGLGLSLDQKVDDY-------VTLFGRYGYQL 375

Query: 329 KKTNAIDNYVQAGLVFKGPFDARAKDDIGFALARVHVNPAYRKNARLVNQAAGLYDYDNP 388
           K     D     G    G +  R  D  G  L   H++  YR  +  ++      D D  
Sbjct: 376 KGKTRFDQSASIGGEVNGSYWGRGADGFGVGLVANHLSKTYRDKSETLDA-----DQDGA 430

Query: 389 GFLPVQDT--EYSAELYYGIHLADWLTVRPNLQYIRHPGGVSQVDGALIGGLKIQSSF 444
             +  + T  E +AE+YY   +     + P+LQ IRHPGG    + A   GL+ Q ++
Sbjct: 431 PDVGYKATSFEQTAEIYYRYRVMPRFDLTPDLQIIRHPGGNPSGEVAYAVGLRGQLTY 488