Pairwise Alignments

Query, 444 a.a., carbohydrate-selective porin from Pseudomonas putida KT2440

Subject, 499 a.a., carbohydrate porin from Magnetospirillum magneticum AMB-1

 Score =  104 bits (260), Expect = 6e-27
 Identities = 112/441 (25%), Positives = 176/441 (39%), Gaps = 45/441 (10%)

Query: 12  LALSALATPAGASEMFASDSP--W----MLGDWGGTRSELLEKGYDFTLGYTGEMGSNLH 65
           L+L+ALA PA A        P  W     LG +GG R+EL +KG    +    EM +N +
Sbjct: 50  LSLTALAHPALADGDCEVTPPGFWERDTALGSFGGARTELCKKGVQLGVTSVNEMLANPY 109

Query: 66  GGYDHDRTARYSDQFTFGSHLDLEKILGWHDTEFQLTVTERHGDNISNDRINDPRVGGFT 125
           GG  H    +   QF     +DLEK+     T         +G  IS   + +  +   +
Sbjct: 110 GGVSHGGKGQGRMQFDLD--IDLEKMAELKGTTLHAGAMWIYGGRISGKNLGN--LMPVS 165

Query: 126 SAQEVWGRGETWRLTQMWIKQKYFDGALDVKFGRFGEGEDF--NSFPCDFQNLAF---CG 180
           + + +  R    RL  +W +Q  FD  L V+ G+    ++F  +     F N  F    G
Sbjct: 166 NIEAIPSR----RLFTLWGQQVLFDDMLSVRLGQLAVDDEFVVSKLSSVFVNSTFGFPFG 221

Query: 181 SQVGNWVGGIWYNWPVSQWALRVRYNLTPELYAQVGVFEQNPSNL----------ESGNG 230
                  GG  +  P      RV+ NLT E+      F  +P+              G  
Sbjct: 222 ISGNLPSGGAAFPMPTP--GARVKLNLTDEVSWMTAAFAGDPAGKFDVRDPQWRNHDGTT 279

Query: 231 FKLSGSG---TQGAVMPFELVWTPRIQGLKGEYRAGYYYSNAKAQDVLKDSNGQPAALSG 287
           F  S      T+GA   + +      +GL G Y+ G +Y +A+  D   D+ GQ  A   
Sbjct: 280 FSFSRGTFYITEGA---YAVNQEKNSKGLPGTYKLGAWYHSARFNDQHFDNLGQSLASGN 336

Query: 288 AAYRSSSSKH--GLWIGAQQQVTSLASDQSRGLSVFANATVHDKKTNAIDNYVQAGLVFK 345
                +  +   G++    Q +         GL VF    V     N +  Y+  G+ +K
Sbjct: 337 TTGIGNPVRGNGGVYFVIDQMLIKGQRWSEEGLGVFLRGGVSPSDRNQVPFYLDGGISYK 396

Query: 346 GPFDARAKDDIGFALARVHVNPAYRKNARLVNQAAGLYDYDNPGFLPVQDTEYSAELYYG 405
           G F  R +D +   +    ++ + +   R   Q  G          PV+D E   E+ Y 
Sbjct: 397 GLFAGREEDTLALGVGYGQLSGSLQGLDRDTRQING------QPTRPVRDYETVIEVTYQ 450

Query: 406 IHLADWLTVRPNLQYIRHPGG 426
             +  W T++P++QY+ HPGG
Sbjct: 451 AQITPWWTIQPDVQYVIHPGG 471