Pairwise Alignments

Query, 805 a.a., DNA-binding, ATP-dependent protease from Pseudomonas putida KT2440

Subject, 813 a.a., ATP-dependent protease La (EC 3.4.21.53) Type I from Variovorax sp. SCN45

 Score =  494 bits (1271), Expect = e-143
 Identities = 292/760 (38%), Positives = 447/760 (58%), Gaps = 24/760 (3%)

Query: 42  VIPIHNRPFFPAQVLPVIVNEEPWAETLDLVAKSPDHCLALFFMDTPPEDHRHFDTSALP 101
           ++P+ +   FP  V+P+ V      + L+L  ++    + +       ++    D   + 
Sbjct: 16  LLPLRDVVVFPHMVIPLFVGRPKSIKALELAMEAERRIMLVAQKAAAKDEPSVEDMFEVG 75

Query: 102 QYGTLVKVHHASRENGKLQFVAQGLSRVRIRNWL--KHHRPPYLVEVEYPRQPAEPTDEV 159
              T++++      +G ++ + +G  R R+      + H    +  VE   +  E   EV
Sbjct: 76  CVSTILQM--LKLPDGTVKVLVEGQQRARVNRIDDGETHFSANVTPVEAV-EGGEKGTEV 132

Query: 160 KAYGMALINAIKELLPLNPLYSEELKNYLNRFSPNDPSPLTDFAAALTSATGNQLQEVLD 219
           +A   A++    + + LN     E+   ++  S +DP  L D  AA      +  Q VLD
Sbjct: 133 EALRRAVMQQFDQYVKLNKKIPPEILTSIS--SIDDPGRLADTIAAHLPLKLDNKQAVLD 190

Query: 220 CVPMLKRMEKVLPMLRKEVEVARLQNEISAEVNRQIGEHQREFFLKEQLKVIQQELGLTK 279
              +  R+E +   L +EV++  +  +I   V RQ+ ++QR+F+L EQ+K IQ+ELG  +
Sbjct: 191 LDDVKARLENLFGQLEREVDILNVDKKIRGRVKRQMEKNQRDFYLNEQVKAIQKELG--E 248

Query: 280 DDRSADLEQFEQRLEGKTLPPQARKRIDEEMGKLAILETGSPEYAVTRNYLEWATALPWG 339
            +  AD+E+ E++++   +  +  K+ + E+ KL ++   S E  V RNY++    LPW 
Sbjct: 249 GEEGADIEEIEKKIKLAKMSKEGLKKAEGELKKLKLMSPMSAEATVVRNYIDVLIGLPWS 308

Query: 340 VYGKDKLDLKHARKVLDQYHSGLDDIKERILEFLAVGAWKGEISGSIVLLVGPPGVGKTS 399
              K K DL +A  VL+  H GL+ +K+RILE+LAV     ++   I+ LVGPPGVGKTS
Sbjct: 309 KKTKIKHDLANAEAVLNADHYGLEKVKDRILEYLAVQQRVDKVKAPILCLVGPPGVGKTS 368

Query: 400 IGKSIAESLGRPFYRFSVGGMRDEAEIKGHRRTYIGAQPGKLVQALKDVEVMNPVIMLDE 459
           +G+SIA++ GR + R ++GGMRDEAEI+GHRRTYIGA PGK++Q L  +   NP+ +LDE
Sbjct: 369 LGQSIAKATGRKYTRMALGGMRDEAEIRGHRRTYIGALPGKVLQGLSKIGTRNPLFLLDE 428

Query: 460 IDKMGQSYQGDPASALLETLDPEQNVDFLDHYLDLRLDLSKVLFVCTANTLDSIPGPLLD 519
           IDK+G  ++GDP+SALLE LDPEQN  F DHY+++  DLS V+FV T+N++ +IP  LLD
Sbjct: 429 IDKLGTDFRGDPSSALLEVLDPEQNHTFGDHYVEVDFDLSDVMFVATSNSM-NIPPALLD 487

Query: 520 RMEVIRLSGYITEEKMTIAKRHLWPKQLEKAGVSKTSLSISDSALRLVIDGYAREAGVRQ 579
           RMEVIRLSGY  +EK  IA ++L PKQ++  GV    L +++ A+R ++  Y REAGVR 
Sbjct: 488 RMEVIRLSGYTEDEKTNIAIKYLLPKQMKNNGVKDEELFVTEEAVRDIVRYYTREAGVRS 547

Query: 580 LEKQLGKLVRKAVV-KLLENPDAKLKIGTKDLETALGIPVF------RSEQVLAGKGVIT 632
           LE++L K+ RK V   LL+    K+ +   +L   LG+  +      +  QV    G + 
Sbjct: 548 LERELSKICRKVVKGLLLKQLTPKVTVDGANLNEFLGVRKYSFGLAEKQNQV----GQVV 603

Query: 633 GLAWTSMGGATLPIEATRIHTHNRG-FKLTGKLGDVMKESAEIAYSYISSNLKQFGGDPG 691
           GLAWT +GG  L IEA  +    +G    TG LGDVMKES E A + + S  ++ G    
Sbjct: 604 GLAWTEVGGDLLTIEA--VTMPGKGVISRTGSLGDVMKESVEAARTVVRSRSRRLGIKDE 661

Query: 692 FFNEAFIHLHVPEGATPKDGPSAGITMASALLSLARDQSAKKGVAMTGELTLTGQVLPIG 751
            F +  IH+HVP+GATPKDGPSAG  M +A +S       +  VAMTGE+TL G+V  IG
Sbjct: 662 VFEKRDIHIHVPDGATPKDGPSAGAAMTTAFVSALTGIPVRSDVAMTGEITLRGEVTAIG 721

Query: 752 GVREKVIAARRQKIFELILPEPNRGDFEELPDYLREGLTV 791
           G++EK++AA R  I  +++PE N  D +++P+ ++ GL +
Sbjct: 722 GLKEKLLAALRGGIKTVLIPEENAKDLQDIPENVKNGLEI 761