Pairwise Alignments

Query, 805 a.a., DNA-binding, ATP-dependent protease from Pseudomonas putida KT2440

Subject, 799 a.a., ATP-dependent protease La (EC 3.4.21.53) Type I from Sphingobium sp. HT1-2

 Score =  531 bits (1369), Expect = e-155
 Identities = 309/771 (40%), Positives = 453/771 (58%), Gaps = 46/771 (5%)

Query: 42  VIPIHNRPFFPAQVLPVIVNEEPWAETLDLVAKSPDHCLALFFMDTPPEDHRH---FDTS 98
           ++P+ +   FP  ++P+ V  +     L+   +       +  +D   +D      +DT 
Sbjct: 7   LLPLRDIVVFPQMIVPLFVGRDKSVAALEAAMEGNKEIFLVSQLDPAEDDPGKDALYDTG 66

Query: 99  ALPQYGTLVKVHHASRENGKLQFVAQGLSRVRIRNWLKHHRPPYLVEVEYPRQPAEPTDE 158
            +     L+K+      +G ++ + +G  R ++ +           E  Y      P +E
Sbjct: 67  VVSVVLQLLKL-----PDGTVRVLVEGKHRAQLADLAP-------AEAGYLVAEVAPVEE 114

Query: 159 VKAYGMALINAIKELLPLNPLYSEELKNY--LNRFSP----------NDPSPLTDFAAAL 206
           + A G        E   L    +E+ +NY  LN+  P          +D   L D  AA 
Sbjct: 115 IVAEG-------PEAAALMRSVAEQFENYAKLNKKLPAETPVQLREIDDAGRLADSVAAN 167

Query: 207 TSATGNQLQEVLDCVPMLKRMEKVLPMLRKEVEVARLQNEISAEVNRQIGEHQREFFLKE 266
            +      Q +L     +KR+E V   +  E+ V +++ +I   V RQ+ + QRE++L E
Sbjct: 168 INVKVADKQSLLVEPDPVKRLEMVFAFMEGELGVLQVEKKIRGRVKRQMEKTQREYYLNE 227

Query: 267 QLKVIQQELGLTKDDRSADLEQFEQRLEGKTLPPQARKRIDEEMGKLAILETGSPEYAVT 326
           QLK IQ+ELG  + +   +L +   ++    L  +AR +   E+ KL  ++  S E  V 
Sbjct: 228 QLKAIQRELGNGEGEEGDELAELADKIAKAKLSKEARAKATAELKKLKGMQPMSAEATVV 287

Query: 327 RNYLEWATALPWGVYGKDKLDLKHARKVLDQYHSGLDDIKERILEFLAVGAWKGEISGSI 386
           RNYL+    LPWG  G+ K DLK A+ +LD+ H  L+ +K+RI+E+LAV A   ++ G I
Sbjct: 288 RNYLDVLLGLPWGKKGRVKTDLKKAQAILDEDHFALEKVKDRIIEYLAVQARTNKLKGPI 347

Query: 387 VLLVGPPGVGKTSIGKSIAESLGRPFYRFSVGGMRDEAEIKGHRRTYIGAQPGKLVQALK 446
           + LVGPPGVGKTS+G+SIA++ GR F R S+GG+RDEAEI+GHRRTYIG+ PGK+V  LK
Sbjct: 348 LCLVGPPGVGKTSLGRSIAKATGREFVRQSLGGVRDEAEIRGHRRTYIGSLPGKVVSNLK 407

Query: 447 DVEVMNPVIMLDEIDKMGQSYQGDPASALLETLDPEQNVDFLDHYLDLRLDLSKVLFVCT 506
               MNP+ +LDEIDK+GQ ++GDPASALLE LDPEQN  F DHYL++ +DLS V+FV T
Sbjct: 408 KAGTMNPLFLLDEIDKLGQDFRGDPASALLEVLDPEQNSKFQDHYLEIDVDLSDVMFVTT 467

Query: 507 ANTLDSIPGPLLDRMEVIRLSGYITEEKMTIAKRHLWPKQLEKAGVSKTSLSISDSALRL 566
           AN+L ++P PLLDRME+IRL GY  +EK+ IA+RHL PKQ++  G+      ++++A+R 
Sbjct: 468 ANSL-NLPQPLLDRMEIIRLEGYTEDEKVEIAQRHLVPKQIDAHGLKNGEFEVTEAAVRD 526

Query: 567 VIDGYAREAGVRQLEKQLGKLVRKAVVKLLENPDAKLKIGTKDLETALGIPVFR------ 620
           +I  Y REAGVR LE+++ +L RKA+ K+LE    K++I  ++L    G+  FR      
Sbjct: 527 LIRYYTREAGVRTLEREVARLARKALRKILEGAFDKVEITPENLADYAGVRKFRHGVGEE 586

Query: 621 SEQVLAGKGVITGLAWTSMGGATLPIEATRIHTHNRGFKLTGKLGDVMKESAEIAYSYIS 680
             Q+    G +TGLAWT +GG  L IEA  +       K TGKLG+VM ES + A+SY+ 
Sbjct: 587 ENQI----GAVTGLAWTEVGGELLTIEAVTVPGKGL-IKTTGKLGEVMNESVQAAFSYVK 641

Query: 681 SNLKQFGGDPGFFNEAFIHLHVPEGATPKDGPSAGITMASALLSLARDQSAKKGVAMTGE 740
           +    +G  P  FN   IH+H+PEGA PKDGPSAGI M + ++S        K VAMTGE
Sbjct: 642 ARSPGYGIKPSLFNRKDIHIHLPEGAVPKDGPSAGIGMVTTIVSTLTGIPVHKDVAMTGE 701

Query: 741 LTLTGQVLPIGGVREKVIAARRQKIFELILPEPNRGDFEELPDYLREGLTV 791
           +TL G+VLPIGG++EK++AA R  I  +++P+ N  D  E+P  +REGL +
Sbjct: 702 VTLRGRVLPIGGLKEKLLAALRGGIKTVLIPQENEKDLAEIPANIREGLEI 752