Pairwise Alignments

Query, 805 a.a., DNA-binding, ATP-dependent protease from Pseudomonas putida KT2440

Subject, 474 a.a., ATP-dependent protease domain protein (EC 3.4.21.-) from Hydrogenophaga sp. GW460-11-11-14-LB1

 Score = 79.7 bits (195), Expect = 3e-19
 Identities = 80/309 (25%), Positives = 141/309 (45%), Gaps = 13/309 (4%)

Query: 235 RKEVEVARLQNEISAEVNRQIGEHQREFFLKEQLKVIQQELGLTKDDRSADLEQFEQRLE 294
           +KE E A+ +   +    R++G  Q+    K + + ++++ GL    R+AD   F +++E
Sbjct: 97  KKEDEKAQTEAAFAEGTPRKVGSDQKA---KGEARRMRRK-GLPI--RNADPHAFHKQVE 150

Query: 295 GKTLPPQARKRI--DEEMGKLAILETGSPEYAVTRNYLEWATALPWGVYGKDKLDLK-HA 351
             TLP + + R+   E + KL   +  S      RN   +    P G + + +      A
Sbjct: 151 --TLPVKRKLRVYDPEALEKLRESKQISDADVRKRNAAIFKDLEPKGAWRRVETPRNLDA 208

Query: 352 RKVLDQYHSGLDDIKERILEFLAVGAWKGEISG-SIVLLVGPPGVGKTSIGKSIAESLGR 410
              L+Q H    ++   + + LA+        G   +LL GPPGVGKT   +++A+ LG 
Sbjct: 209 VLALEQTHPHFSEVIRFVADRLALAKVSRRPVGIPPMLLAGPPGVGKTHFCETLAKVLGV 268

Query: 411 PFYRFSVGGMRDEAEIKGHRRTYIGAQPGKLVQALKDVEVMNPVIMLDEIDK-MGQSYQG 469
           P  R  +      + + G   T+   + G + + L   +  NPV++LDE+DK  G S   
Sbjct: 269 PVRRHPMDQAETSSALLGSEVTWGNTRVGLVFEMLAQGDYANPVVILDELDKATGFSRSA 328

Query: 470 DPASALLETLDPEQNVDFLDHYLDLRLDLSKVLFVCTANTLDSIPGPLLDRMEVIRLSGY 529
           DP + L   L+P       D  +++ LD S + ++ T+N    I   L  RM    +   
Sbjct: 329 DPTAVLHSLLEPVSASRVRDQSVEVELDASLITWIATSNYPWLIAPTLRSRMRAFHICMP 388

Query: 530 ITEEKMTIA 538
             E+ + +A
Sbjct: 389 DAEQAIRVA 397