Pairwise Alignments

Query, 805 a.a., DNA-binding, ATP-dependent protease from Pseudomonas putida KT2440

Subject, 346 a.a., Holliday junction DNA helicase RuvB from Agrobacterium fabrum C58

 Score = 49.3 bits (116), Expect = 3e-10
 Identities = 64/244 (26%), Positives = 105/244 (43%), Gaps = 50/244 (20%)

Query: 355 LDQYHSGLDDIKERILEFLAVGAWKGEISGSIVLLVGPPGVGKTSIGKSIAESLGRPFYR 414
           LD + +G  + +  +  F+     +GE     VL VGPPG+GKT++ + +A+ LG  F  
Sbjct: 26  LDDF-TGQAEARANLKVFIEAAKNRGEALDH-VLFVGPPGLGKTTLAQIMAKELGVNFK- 82

Query: 415 FSVGGMRDEAEIKGHRRTYIGAQPGKLVQALKDVEVMNPVIMLDEIDKMGQSYQGDPASA 474
            S  G              + A+ G L   L ++E  + V+ +DEI ++          A
Sbjct: 83  -STSGP-------------VIAKAGDLAALLTNLEERD-VLFIDEIHRLN--------PA 119

Query: 475 LLETLDPEQNVDFLDHYL-------DLRLDLSKVLFVCTANTLDSIPGPLLDRMEV-IRL 526
           + E L P      LD  +        +++DLSK   V     L  +  PL DR  + +RL
Sbjct: 120 VEEILYPAMEDFQLDLIIGEGPAARSVKIDLSKFTLVAATTRLGLLTTPLRDRFGIPVRL 179

Query: 527 SGYITEEKMTIAKRHLWPKQLEKAGVSKTSLSISDSALRLVIDGYAREAGVRQLEKQLGK 586
           + Y  +E   I +R          G     L+++D   R +    AR A  R   +  G+
Sbjct: 180 AFYTVDELELIVRR----------GARLMGLNMTDGGAREI----ARRA--RGTPRIAGR 223

Query: 587 LVRK 590
           L+R+
Sbjct: 224 LLRR 227