Pairwise Alignments

Query, 193 a.a., RNA polymerase sigma E factor from Pseudomonas putida KT2440

Subject, 169 a.a., ECF RNA polymerase sigma factor EcfG from Azospirillum sp. SherDot2

 Score = 78.2 bits (191), Expect = 8e-20
 Identities = 45/142 (31%), Positives = 76/142 (53%), Gaps = 11/142 (7%)

Query: 41  VHDTHEAQDVAQEAFIKAYRALGNFRGDSAFYTWLYRIAINTAKNYLVSRGRRPPDSDVS 100
           + ++ +A+D+ QEA  +A     +F+  +    WL+ I  N   N + S+  RP + DV 
Sbjct: 23  MRNSADAEDLVQEALTRAVARADSFQAGTNLRAWLFTILHNVHVNQVRSKAARPQEVDVD 82

Query: 101 SEDAEFYDGDHGLKDLESPERSLLRDEIEGTVHRTIQQLPEDLRTALTLREFDGLSYEDI 160
             +++          L SP R   R E+   + R + +LPE+ R  L L   +GL Y+++
Sbjct: 83  DVESK----------LVSPPRQEERVELREMM-RAVDELPEEQRKVLLLVALEGLKYDEV 131

Query: 161 ASVMQCPVGTVRSRIFRAREAI 182
           A ++  P+GTV SR+ RAREA+
Sbjct: 132 ADMLGVPIGTVMSRLSRAREAV 153