Pairwise Alignments

Query, 429 a.a., tricarboxylate-specific outer membrane porin from Pseudomonas putida KT2440

Subject, 433 a.a., outer-membrane porin D from Pseudomonas putida KT2440

 Score =  469 bits (1207), Expect = e-137
 Identities = 236/434 (54%), Positives = 315/434 (72%), Gaps = 13/434 (2%)

Query: 6   PQAFAPTRSFIARPSAIASALALAGVAPMSQAA-FFEDSTATFETRNMYFNRDFRDGTSA 64
           P+ F+P   F   P    + L L      +QAA F ED++A  E RN+YFNRDFRDG S+
Sbjct: 3   PRMFSP---FPLAPGRRVTGLFLLCAGVNAQAAGFLEDASAKIEARNVYFNRDFRDGYSS 59

Query: 65  QQ---SKRDEWAQGFILNFESGYTDGTVGFGLDALGMLGIKLDSSPDRTDSGLLPT--HD 119
                SKR+EWAQGFILN +SGYT G VG G+DALGM G KLDSSP  ++SGLLP+  HD
Sbjct: 60  SSQGASKREEWAQGFILNVQSGYTQGPVGVGVDALGMFGFKLDSSPADSNSGLLPSSGHD 119

Query: 120 DGKAADEYSKLGLTGKVKISQTELKIGTLIPELPTLQPNDGRILPQTFEGGLLTSKEIKG 179
             ++AD+Y+K+GL  KVK+S T LK G+++P++P L+ NDGR+LP  F G +LTS+E+  
Sbjct: 120 PRRSADQYAKMGLAAKVKVSNTVLKYGSMMPDVPLLKYNDGRLLPTLFHGAMLTSEELHD 179

Query: 180 LTFTGGRIDKAKDRNDTNWEDLALNNKNGRFGGTFSADNLALGGLDYQFTDRITGSYHFA 239
           L FT  R+DK   R+ T+ +D+ ++ KN R+     AD+  L G+DY+F +R +  Y  A
Sbjct: 180 LKFTLARLDKYTARDSTDRQDIRVHCKNKRYACDTEADHFDLAGVDYRFNERFSAQYQVA 239

Query: 240 QLDDIYRQHFIGMVATQPWGPGTLGADLRLAMSDDAGAAKAGNIDNTTVNGMLSYALGGH 299
           +L++IYRQHF+G+VA+QP   G+L AD+RL  SDD G A+AG ID+   +GML Y+LGGH
Sbjct: 240 KLENIYRQHFLGLVASQPLPVGSLSADMRLIKSDDIGNARAGEIDHRAFSGMLGYSLGGH 299

Query: 300 KVSAAWQQLSGESAFPYVDGADPYLVNFVQINDFAGADERSWQARYDYNFAALGVPGLTF 359
           K+SA WQ++ G SA PY+DG++PYLVN+ Q+NDFA A ERSWQ RYDY+F ALGVPGLTF
Sbjct: 300 KLSAGWQRMYGNSAMPYLDGSNPYLVNYAQVNDFAAAQERSWQVRYDYDFKALGVPGLTF 359

Query: 360 MTRYISGDNVS-RAAGGEGKEWERNTELKYVVQSGPLKNVAVRLRNATFRSNF---ARDA 415
            TRYI+GDN+    +  EGKEWER+TE KY VQSG  K+V+VRLRN+T+RSN+   ARD 
Sbjct: 360 FTRYINGDNIKVPGSSVEGKEWERDTEFKYQVQSGTFKDVSVRLRNSTYRSNYERWARDM 419

Query: 416 DEVRLLVSYSVALW 429
           DE R++VSY+ +++
Sbjct: 420 DETRVIVSYNFSIF 433