Pairwise Alignments

Query, 429 a.a., tricarboxylate-specific outer membrane porin from Pseudomonas putida KT2440

Subject, 426 a.a., putative Porin from Pseudomonas putida KT2440

 Score =  377 bits (967), Expect = e-109
 Identities = 197/420 (46%), Positives = 268/420 (63%), Gaps = 15/420 (3%)

Query: 18  RPSAIASALALAGVAPMSQAAFFEDSTATFETRNMYFNRDFRDGTSAQQSKRDEWAQGFI 77
           R S + SAL  A     +QAAF  D + + E RN YF+RDF  G SA QS+R EWAQGF+
Sbjct: 7   RASLVLSALYCA--CQTAQAAFIHDGSGSLELRNFYFDRDFH-GDSATQSRRGEWAQGFM 63

Query: 78  LNFESGYTDGTVGFGLDALGMLGIKLDSSPDRTDSGLLPTHDDGKAADEYSKLGLTGKVK 137
           L  +SGYTDG VGFGLDA GMLG+KLDSSPDR+ SGLLP   D +AAD+Y+K   T K +
Sbjct: 64  LRLQSGYTDGVVGFGLDAAGMLGLKLDSSPDRSGSGLLPRGSDKRAADDYAKAVATFKAR 123

Query: 138 ISQTELKIGTLIPELPTLQPNDGRILPQTFEGGLLTSKEIKGLTFTGGRIDKAKDRNDTN 197
           ++Q+ELK G L P+LP L  N  R+ PQ F G  L SK++   TFT  ++D  K R+ T+
Sbjct: 124 LAQSELKAGGLSPQLPLLASNSSRLFPQWFNGVQLVSKDLDRFTFTLLQVDATKLRDSTD 183

Query: 198 WEDLALNNKNGRFGGTFSADNLALGGLDYQFTDRITGSYHFAQLDDIYRQHFIGMVATQP 257
           +EDL    + G +  T ++D L   G+DYQ  + +T S H + L+D++R+ F G      
Sbjct: 184 YEDLTAMAQQGAYSATVTSDRLRYAGVDYQPLNNLTLSLHTSVLEDLFRRDFAGFKFKTR 243

Query: 258 WGPGTLGADLRLAMSDDAGAAKAGNIDNTTVNGMLSYALGGHKVSAAWQQLSGESAFPYV 317
            GPG +  + R   + + G A  G +DN T++    Y++ GH  S  +Q++ G++A+ YV
Sbjct: 244 LGPGDVFTEWRWFNAREQGRALLGGVDNQTLSTNFGYSVQGHTFSGGYQKVRGDTAYAYV 303

Query: 318 DGADPYLVNFVQINDFAGADERSWQARYDYNFAALGVPGLTFMTRYISGDNVS------- 370
            G D YL +  Q++ FA A+ER+W  RYDYNFAA+G+PGLTF  RY+ GD V        
Sbjct: 304 GGTDTYLFSEQQVSTFALANERAWMLRYDYNFAAVGIPGLTFNVRYVKGDQVDPQRIASV 363

Query: 371 -----RAAGGEGKEWERNTELKYVVQSGPLKNVAVRLRNATFRSNFARDADEVRLLVSYS 425
                 A  GEG+EWER T++ YVVQSG L+NV++R RNA+ RSNFA  ADE R++V Y+
Sbjct: 364 KGRALAAGDGEGREWERTTDITYVVQSGALRNVSLRWRNASMRSNFADAADENRVIVGYT 423